Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.141.v1.A.nonSL25-1

Possible name(s)

RPL17; RPL17-C18orf32

Gene model

KH2012:KH.C2.141

Location

KhC2 [1,831,043 / 1,833,867]

Sequences

Amino acid sequence

Length: 132

>KH.C2.141.v1.A.nonSL25-1
WRSGSMCSSKRVQNYPEITTLTSHCVSNQGRWPKKSATFLLQMLKTAESNADVKGLDVDS
LVIDHIQVNAAAKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPRVEEEQKKKKVSK
KKIARQKLMGKE

Nucleotide sequence

Length: 983

>KH2012:KH.C2.141.v1.A.nonSL25-1
CCTTTTTTAACTAATTATAATCCAAGTTAATCGTGGTTTATCGTGGTTATAGTGCAGTAT
AAAGTATCCTATTGTTACACAGAATGACGAGATACTCTCAAGACCCGGAAAATCCGGCCA
AATCATGCAAGGCGAGGGGTTCAGACCTTCGAGTTCACTTCAAGAACACCAGAGAAACCG
CTCAAGCTATTAAGGGAATGCACATTCGCAAGGCTACTCAGTACCTTAAGGACGTTTGCG
AAAAAAAGCGATGCATTCCATTTCGTCGATTTAATGGCGGAGTGGGTCGATGTGCTCAAG
CAAAAGAGTTCAAAACTACCCAGAAATCACAACATTAACATCACACTGCGTTTCTAACCA
GGGTCGATGGCCAAAGAAGAGCGCCACATTCCTCCTGCAGATGTTGAAGACTGCTGAGAG
CAATGCTGATGTAAAGGGTCTTGATGTTGATTCTCTTGTAATAGATCACATCCAGGTGAA
TGCTGCAGCAAAGATGAGACGACGAACTTACAGAGCCCACGGTCGCATTAATCCCTACAT
GAGCTCCCCGTGTCACATTGAAATGATCCTCACTGAGAAGGAGCAGATTGTTCCACGGGT
TGAGGAGGAACAGAAAAAGAAGAAGGTTTCAAAGAAGAAGATTGCTCGCCAGAAGTTAAT
GGGCAAGGAGTAGATCTCTCAATAAATTTACTATTGAAACCGAGTGCTTGTTTGTGTTGT
GTATTGGTGAAATCAGATGATGATTTTATAGTCTACTACTAACGGAGCAGTGTGCAGTTT
ATCTTGAAAATCTTGTGAATTAAGTTACTCTGGGTTAGGGTGAAAAACACGTCTATGATT
AAACTAGTAAGCTTCCTTTTTAGTGGGCATAAATAAAATTAGGTATTCTGTACTAAGTAA
TGCACAGGCTAAGTTTTCCCATGCACTCCTCTTACCAGTACTAACTTTAGTCATTAGATG
AGAATCACCCTTAAAATTAAGTC

InterProScan

Gene3D	Ribosomal_L22/L17_sf (IPR036394) - T[6-132] 5.0E-43
PANTHER	Ribosomal_L22/L17_euk/arc (IPR005721) - T[24-131] 6.9E-56
SUPERFAMILY	Ribosomal_L22/L17_sf (IPR036394) - T[27-102] 2.75E-31
TIGRFAM	Ribosomal_L22/L17_euk/arc (IPR005721) - T[28-102] 4.1E-32
Pfam	Ribosomal_L22 (IPR001063) - T[30-100] 4.2E-30
CDD	Ribosomal_L22 (IPR001063) - T[33-99] 1.26937E-26
ProSitePatterns	Ribosomal_L22/L17_CS (IPR018260) - T[75-99] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL17_HUMAN	88.095 %	159	6.83E-51