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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Clone 'cidg829c10' > 
  3. Transcript 'KH2012:KH.C2.141.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.141.v2.A.nonSL11-1

Possible name(s)

RPL17; RPL17-C18orf32

Gene model

KH2012:KH.C2.141

Location

KhC2 [1,831,043 / 1,833,911]

Sequences

Amino acid sequence

Length: 190

>KH.C2.141.v2.A.nonSL11-1
SILLLHRMTRYSQDPENPAKSCKARGSDLRVHFKNTRETAQAIKGMHIRKATQYLKDVCE
KKRCIPFRRFNGGVGRCAQAKEFKTTQGRWPKKSATFLLQMLKTAESNADVKGLDVDSLV
IDHIQVNAAAKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPRVEEEQKKKKVSKKK
IARQKLMGKE

Nucleotide sequence

Length: 989

>KH2012:KH.C2.141.v2.A.nonSL11-1
TGAAAAAGTCTTTCCCATGACTGCGTGTCATGTAGGTAGTTGTTCCTTTTTTAACTAATT
ATAATCCAAGTTAATCGTGGTTTATCGTGGTTATAGTGCAGTATAAAGTATCCTATTGTT
ACACAGAATGACGAGATACTCTCAAGACCCGGAAAATCCGGCCAAATCATGCAAGGCGAG
GGGTTCAGACCTTCGAGTTCACTTCAAGAACACCAGAGAAACCGCTCAAGCTATTAAGGG
AATGCACATTCGCAAGGCTACTCAGTACCTTAAGGACGTTTGCGAAAAAAAGCGATGCAT
TCCATTTCGTCGATTTAATGGCGGAGTGGGTCGATGTGCTCAAGCAAAAGAGTTCAAAAC
TACCCAGGGTCGATGGCCAAAGAAGAGCGCCACATTCCTCCTGCAGATGTTGAAGACTGC
TGAGAGCAATGCTGATGTAAAGGGTCTTGATGTTGATTCTCTTGTAATAGATCACATCCA
GGTGAATGCTGCAGCAAAGATGAGACGACGAACTTACAGAGCCCACGGTCGCATTAATCC
CTACATGAGCTCCCCGTGTCACATTGAAATGATCCTCACTGAGAAGGAGCAGATTGTTCC
ACGGGTTGAGGAGGAACAGAAAAAGAAGAAGGTTTCAAAGAAGAAGATTGCTCGCCAGAA
GTTAATGGGCAAGGAGTAGATCTCTCAATAAATTTACTATTGAAACCGAGTGCTTGTTTG
TGTTGTGTATTGGTGAAATCAGATGATGATTTTATAGTCTACTACTAACGGAGCAGTGTG
CAGTTTATCTTGAAAATCTTGTGAATTAAGTTACTCTGGGTTAGGGTGAAAAACACGTCT
ATGATTAAACTAGTAAGCTTCCTTTTTAGTGGGCATAAATAAAATTAGGTATTCTGTACT
AAGTAATGCACAGGCTAAGTTTTCCCATGCACTCCTCTTACCAGTACTAACTTTAGTCAT
TAGATGAGAATCACCCTTAAAATTAAGTC

InterProScan

Gene3D
Ribosomal_L22/L17_sf (IPR036394) - T[8-190] 2.3E-84
SUPERFAMILY
Ribosomal_L22/L17_sf (IPR036394) - T[8-160] 1.23E-60
PANTHER
Ribosomal_L22/L17_euk/arc (IPR005721) - T[8-185] 2.9E-100
TIGRFAM
Ribosomal_L22/L17_euk/arc (IPR005721) - T[11-160] 1.1E-64
CDD
Ribosomal_L22 (IPR001063) - T[22-157] 3.174E-36
Pfam
Ribosomal_L22 (IPR001063) - T[24-158] 2.8E-43
ProSitePatterns
Ribosomal_L22/L17_CS (IPR018260) - T[133-157] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL17_HUMAN 84.049 % 297 1.78E-104