Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.141.v2.A.nonSL19-1

Possible name(s)

RPL17; RPL17-C18orf32

Gene model

KH2012:KH.C2.141

Location

KhC2 [1,831,043 / 1,833,797]

Sequences

Amino acid sequence

Length: 187

>KH.C2.141.v2.A.nonSL19-1
LLHRMTRYSQDPENPAKSCKARGSDLRVHFKNTRETAQAIKGMHIRKATQYLKDVCEKKR
CIPFRRFNGGVGRCAQAKEFKTTQGRWPKKSATFLLQMLKTAESNADVKGLDVDSLVIDH
IQVNAAAKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPRVEEEQKKKKVSKKKIAR
QKLMGKE

Nucleotide sequence

Length: 875

>KH2012:KH.C2.141.v2.A.nonSL19-1
ATTGTTACACAGAATGACGAGATACTCTCAAGACCCGGAAAATCCGGCCAAATCATGCAA
GGCGAGGGGTTCAGACCTTCGAGTTCACTTCAAGAACACCAGAGAAACCGCTCAAGCTAT
TAAGGGAATGCACATTCGCAAGGCTACTCAGTACCTTAAGGACGTTTGCGAAAAAAAGCG
ATGCATTCCATTTCGTCGATTTAATGGCGGAGTGGGTCGATGTGCTCAAGCAAAAGAGTT
CAAAACTACCCAGGGTCGATGGCCAAAGAAGAGCGCCACATTCCTCCTGCAGATGTTGAA
GACTGCTGAGAGCAATGCTGATGTAAAGGGTCTTGATGTTGATTCTCTTGTAATAGATCA
CATCCAGGTGAATGCTGCAGCAAAGATGAGACGACGAACTTACAGAGCCCACGGTCGCAT
TAATCCCTACATGAGCTCCCCGTGTCACATTGAAATGATCCTCACTGAGAAGGAGCAGAT
TGTTCCACGGGTTGAGGAGGAACAGAAAAAGAAGAAGGTTTCAAAGAAGAAGATTGCTCG
CCAGAAGTTAATGGGCAAGGAGTAGATCTCTCAATAAATTTACTATTGAAACCGAGTGCT
TGTTTGTGTTGTGTATTGGTGAAATCAGATGATGATTTTATAGTCTACTACTAACGGAGC
AGTGTGCAGTTTATCTTGAAAATCTTGTGAATTAAGTTACTCTGGGTTAGGGTGAAAAAC
ACGTCTATGATTAAACTAGTAAGCTTCCTTTTTAGTGGGCATAAATAAAATTAGGTATTC
TGTACTAAGTAATGCACAGGCTAAGTTTTCCCATGCACTCCTCTTACCAGTACTAACTTT
AGTCATTAGATGAGAATCACCCTTAAAATTAAGTC

InterProScan

Gene3D	Ribosomal_L22/L17_sf (IPR036394) - T[5-187] 2.2E-84
PANTHER	Ribosomal_L22/L17_euk/arc (IPR005721) - T[5-182] 2.8E-100
SUPERFAMILY	Ribosomal_L22/L17_sf (IPR036394) - T[5-157] 1.16E-60
TIGRFAM	Ribosomal_L22/L17_euk/arc (IPR005721) - T[8-157] 1.0E-64
CDD	Ribosomal_L22 (IPR001063) - T[19-154] 3.2802E-36
Pfam	Ribosomal_L22 (IPR001063) - T[21-155] 2.6E-43
ProSitePatterns	Ribosomal_L22/L17_CS (IPR018260) - T[130-154] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL17_HUMAN	84.049 %	297	1.9E-104