Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.141.v2.A.nonSL20-1

Possible name(s)

RPL17; RPL17-C18orf32

Gene model

KH2012:KH.C2.141

Location

KhC2 [1,831,043 / 1,833,804]

Sequences

Amino acid sequence

Length: 189

>KH.C2.141.v2.A.nonSL20-1
ILLLHRMTRYSQDPENPAKSCKARGSDLRVHFKNTRETAQAIKGMHIRKATQYLKDVCEK
KRCIPFRRFNGGVGRCAQAKEFKTTQGRWPKKSATFLLQMLKTAESNADVKGLDVDSLVI
DHIQVNAAAKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPRVEEEQKKKKVSKKKI
ARQKLMGKE

Nucleotide sequence

Length: 882

>KH2012:KH.C2.141.v2.A.nonSL20-1
GTATCCTATTGTTACACAGAATGACGAGATACTCTCAAGACCCGGAAAATCCGGCCAAAT
CATGCAAGGCGAGGGGTTCAGACCTTCGAGTTCACTTCAAGAACACCAGAGAAACCGCTC
AAGCTATTAAGGGAATGCACATTCGCAAGGCTACTCAGTACCTTAAGGACGTTTGCGAAA
AAAAGCGATGCATTCCATTTCGTCGATTTAATGGCGGAGTGGGTCGATGTGCTCAAGCAA
AAGAGTTCAAAACTACCCAGGGTCGATGGCCAAAGAAGAGCGCCACATTCCTCCTGCAGA
TGTTGAAGACTGCTGAGAGCAATGCTGATGTAAAGGGTCTTGATGTTGATTCTCTTGTAA
TAGATCACATCCAGGTGAATGCTGCAGCAAAGATGAGACGACGAACTTACAGAGCCCACG
GTCGCATTAATCCCTACATGAGCTCCCCGTGTCACATTGAAATGATCCTCACTGAGAAGG
AGCAGATTGTTCCACGGGTTGAGGAGGAACAGAAAAAGAAGAAGGTTTCAAAGAAGAAGA
TTGCTCGCCAGAAGTTAATGGGCAAGGAGTAGATCTCTCAATAAATTTACTATTGAAACC
GAGTGCTTGTTTGTGTTGTGTATTGGTGAAATCAGATGATGATTTTATAGTCTACTACTA
ACGGAGCAGTGTGCAGTTTATCTTGAAAATCTTGTGAATTAAGTTACTCTGGGTTAGGGT
GAAAAACACGTCTATGATTAAACTAGTAAGCTTCCTTTTTAGTGGGCATAAATAAAATTA
GGTATTCTGTACTAAGTAATGCACAGGCTAAGTTTTCCCATGCACTCCTCTTACCAGTAC
TAACTTTAGTCATTAGATGAGAATCACCCTTAAAATTAAGTC

InterProScan

SUPERFAMILY	Ribosomal_L22/L17_sf (IPR036394) - T[7-159] 1.2E-60
Gene3D	Ribosomal_L22/L17_sf (IPR036394) - T[7-189] 2.3E-84
PANTHER	Ribosomal_L22/L17_euk/arc (IPR005721) - T[7-184] 2.9E-100
TIGRFAM	Ribosomal_L22/L17_euk/arc (IPR005721) - T[10-159] 1.1E-64
CDD	Ribosomal_L22 (IPR001063) - T[21-156] 4.49561E-36
Pfam	Ribosomal_L22 (IPR001063) - T[23-157] 2.7E-43
ProSitePatterns	Ribosomal_L22/L17_CS (IPR018260) - T[132-156] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL17_HUMAN	84.049 %	297	1.84E-104