Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.141.v2.A.nonSL27-1

Possible name(s)

RPL17; RPL17-C18orf32

Gene model

KH2012:KH.C2.141

Location

KhC2 [1,831,043 / 1,833,809]

Sequences

Amino acid sequence

Length: 190

>KH.C2.141.v2.A.nonSL27-1
SILLLHRMTRYSQDPENPAKSCKARGSDLRVHFKNTRETAQAIKGMHIRKATQYLKDVCE
KKRCIPFRRFNGGVGRCAQAKEFKTTQGRWPKKSATFLLQMLKTAESNADVKGLDVDSLV
IDHIQVNAAAKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPRVEEEQKKKKVSKKK
IARQKLMGKE

Nucleotide sequence

Length: 887

>KH2012:KH.C2.141.v2.A.nonSL27-1
ATAAAGTATCCTATTGTTACACAGAATGACGAGATACTCTCAAGACCCGGAAAATCCGGC
CAAATCATGCAAGGCGAGGGGTTCAGACCTTCGAGTTCACTTCAAGAACACCAGAGAAAC
CGCTCAAGCTATTAAGGGAATGCACATTCGCAAGGCTACTCAGTACCTTAAGGACGTTTG
CGAAAAAAAGCGATGCATTCCATTTCGTCGATTTAATGGCGGAGTGGGTCGATGTGCTCA
AGCAAAAGAGTTCAAAACTACCCAGGGTCGATGGCCAAAGAAGAGCGCCACATTCCTCCT
GCAGATGTTGAAGACTGCTGAGAGCAATGCTGATGTAAAGGGTCTTGATGTTGATTCTCT
TGTAATAGATCACATCCAGGTGAATGCTGCAGCAAAGATGAGACGACGAACTTACAGAGC
CCACGGTCGCATTAATCCCTACATGAGCTCCCCGTGTCACATTGAAATGATCCTCACTGA
GAAGGAGCAGATTGTTCCACGGGTTGAGGAGGAACAGAAAAAGAAGAAGGTTTCAAAGAA
GAAGATTGCTCGCCAGAAGTTAATGGGCAAGGAGTAGATCTCTCAATAAATTTACTATTG
AAACCGAGTGCTTGTTTGTGTTGTGTATTGGTGAAATCAGATGATGATTTTATAGTCTAC
TACTAACGGAGCAGTGTGCAGTTTATCTTGAAAATCTTGTGAATTAAGTTACTCTGGGTT
AGGGTGAAAAACACGTCTATGATTAAACTAGTAAGCTTCCTTTTTAGTGGGCATAAATAA
AATTAGGTATTCTGTACTAAGTAATGCACAGGCTAAGTTTTCCCATGCACTCCTCTTACC
AGTACTAACTTTAGTCATTAGATGAGAATCACCCTTAAAATTAAGTC

InterProScan

Gene3D	Ribosomal_L22/L17_sf (IPR036394) - T[8-190] 2.3E-84
SUPERFAMILY	Ribosomal_L22/L17_sf (IPR036394) - T[8-160] 1.23E-60
PANTHER	Ribosomal_L22/L17_euk/arc (IPR005721) - T[8-185] 2.9E-100
TIGRFAM	Ribosomal_L22/L17_euk/arc (IPR005721) - T[11-160] 1.1E-64
CDD	Ribosomal_L22 (IPR001063) - T[22-157] 3.174E-36
Pfam	Ribosomal_L22 (IPR001063) - T[24-158] 2.8E-43
ProSitePatterns	Ribosomal_L22/L17_CS (IPR018260) - T[133-157] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL17_HUMAN	84.049 %	297	1.78E-104