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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.218.v1...'
  2. Transcript 'KH2012:KH.C2.141.v1....'
  3. Transcript 'KH2012:KH.C2.141.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.141.v2.A.nonSL36-1

Possible name(s)

RPL17; RPL17-C18orf32

Location

KhC2 [1,831,043 / 1,833,711]

Sequences

Amino acid sequence

Length: 158

>KH.C2.141.v2.A.nonSL36-1
FKNTRETAQAIKGMHIRKATQYLKDVCEKKRCIPFRRFNGGVGRCAQAKEFKTTQGRWPK
KSATFLLQMLKTAESNADVKGLDVDSLVIDHIQVNAAAKMRRRTYRAHGRINPYMSSPCH
IEMILTEKEQIVPRVEEEQKKKKVSKKKIARQKLMGKE

Nucleotide sequence

Length: 789

>KH2012:KH.C2.141.v2.A.nonSL36-1
ACTTCAAGAACACCAGAGAAACCGCTCAAGCTATTAAGGGAATGCACATTCGCAAGGCTA
CTCAGTACCTTAAGGACGTTTGCGAAAAAAAGCGATGCATTCCATTTCGTCGATTTAATG
GCGGAGTGGGTCGATGTGCTCAAGCAAAAGAGTTCAAAACTACCCAGGGTCGATGGCCAA
AGAAGAGCGCCACATTCCTCCTGCAGATGTTGAAGACTGCTGAGAGCAATGCTGATGTAA
AGGGTCTTGATGTTGATTCTCTTGTAATAGATCACATCCAGGTGAATGCTGCAGCAAAGA
TGAGACGACGAACTTACAGAGCCCACGGTCGCATTAATCCCTACATGAGCTCCCCGTGTC
ACATTGAAATGATCCTCACTGAGAAGGAGCAGATTGTTCCACGGGTTGAGGAGGAACAGA
AAAAGAAGAAGGTTTCAAAGAAGAAGATTGCTCGCCAGAAGTTAATGGGCAAGGAGTAGA
TCTCTCAATAAATTTACTATTGAAACCGAGTGCTTGTTTGTGTTGTGTATTGGTGAAATC
AGATGATGATTTTATAGTCTACTACTAACGGAGCAGTGTGCAGTTTATCTTGAAAATCTT
GTGAATTAAGTTACTCTGGGTTAGGGTGAAAAACACGTCTATGATTAAACTAGTAAGCTT
CCTTTTTAGTGGGCATAAATAAAATTAGGTATTCTGTACTAAGTAATGCACAGGCTAAGT
TTTCCCATGCACTCCTCTTACCAGTACTAACTTTAGTCATTAGATGAGAATCACCCTTAA
AATTAAGTC

InterProScan

Gene3D
Ribosomal_L22/L17_sf (IPR036394) - T[1-158] 6.4E-72
CDD
Ribosomal_L22 (IPR001063) - T[1-125] 2.20819E-31
Pfam
Ribosomal_L22 (IPR001063) - T[1-126] 1.4E-39
TIGRFAM
Ribosomal_L22/L17_euk/arc (IPR005721) - T[1-128] 2.1E-55
PANTHER
Ribosomal_L22/L17_euk/arc (IPR005721) - T[1-157] 2.1E-85
SUPERFAMILY
Ribosomal_L22/L17_sf (IPR036394) - T[1-128] 4.32E-53
ProSitePatterns
Ribosomal_L22/L17_CS (IPR018260) - T[101-125] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL17_HUMAN 84.783 % 253 1.54E-87