Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.141.v2.A.SL5-1

Possible name(s)

RPL17; RPL17-C18orf32

Gene model

KH2012:KH.C2.141

Location

KhC2 [1,831,043 / 1,833,785]

Sequences

Amino acid sequence

Length: 183

>KH.C2.141.v2.A.SL5-1
MTRYSQDPENPAKSCKARGSDLRVHFKNTRETAQAIKGMHIRKATQYLKDVCEKKRCIPF
RRFNGGVGRCAQAKEFKTTQGRWPKKSATFLLQMLKTAESNADVKGLDVDSLVIDHIQVN
AAAKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPRVEEEQKKKKVSKKKIARQKLM
GKE

Nucleotide sequence

Length: 863

>KH2012:KH.C2.141.v2.A.SL5-1
AATGACGAGATACTCTCAAGACCCGGAAAATCCGGCCAAATCATGCAAGGCGAGGGGTTC
AGACCTTCGAGTTCACTTCAAGAACACCAGAGAAACCGCTCAAGCTATTAAGGGAATGCA
CATTCGCAAGGCTACTCAGTACCTTAAGGACGTTTGCGAAAAAAAGCGATGCATTCCATT
TCGTCGATTTAATGGCGGAGTGGGTCGATGTGCTCAAGCAAAAGAGTTCAAAACTACCCA
GGGTCGATGGCCAAAGAAGAGCGCCACATTCCTCCTGCAGATGTTGAAGACTGCTGAGAG
CAATGCTGATGTAAAGGGTCTTGATGTTGATTCTCTTGTAATAGATCACATCCAGGTGAA
TGCTGCAGCAAAGATGAGACGACGAACTTACAGAGCCCACGGTCGCATTAATCCCTACAT
GAGCTCCCCGTGTCACATTGAAATGATCCTCACTGAGAAGGAGCAGATTGTTCCACGGGT
TGAGGAGGAACAGAAAAAGAAGAAGGTTTCAAAGAAGAAGATTGCTCGCCAGAAGTTAAT
GGGCAAGGAGTAGATCTCTCAATAAATTTACTATTGAAACCGAGTGCTTGTTTGTGTTGT
GTATTGGTGAAATCAGATGATGATTTTATAGTCTACTACTAACGGAGCAGTGTGCAGTTT
ATCTTGAAAATCTTGTGAATTAAGTTACTCTGGGTTAGGGTGAAAAACACGTCTATGATT
AAACTAGTAAGCTTCCTTTTTAGTGGGCATAAATAAAATTAGGTATTCTGTACTAAGTAA
TGCACAGGCTAAGTTTTCCCATGCACTCCTCTTACCAGTACTAACTTTAGTCATTAGATG
AGAATCACCCTTAAAATTAAGTC

InterProScan

PANTHER	Ribosomal_L22/L17_euk/arc (IPR005721) - T[1-178] 2.6E-100
SUPERFAMILY	Ribosomal_L22/L17_sf (IPR036394) - T[1-153] 1.07E-60
Gene3D	Ribosomal_L22/L17_sf (IPR036394) - T[1-183] 2.0E-84
TIGRFAM	Ribosomal_L22/L17_euk/arc (IPR005721) - T[4-153] 9.6E-65
CDD	Ribosomal_L22 (IPR001063) - T[15-150] 1.61611E-36
Pfam	Ribosomal_L22 (IPR001063) - T[17-151] 2.5E-43
ProSitePatterns	Ribosomal_L22/L17_CS (IPR018260) - T[126-150] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL17_HUMAN	84.049 %	297	1.18E-104