- Transcript 'KH2012:KH.C2.161.v3....'
Transcript Model
Transcript Id
KH2012:KH.C2.161.v3.A.SL12-1
Possible name(s)
NR1H3; NR1H4; THRB
Gene model
Location
KhC2 [5,033,578 / 5,039,470]
Amino acid sequence
Length: 302
>KH.C2.161.v3.A.SL12-1
CKYGGKCEMDMYTRRKCPECRLRKCRAVGMLEECLLTEIQCKSKRRSRKVKTIQEDDETK
ESVPNPIPPPKPAVKSPPEPDETDLLIELVGKSFSDYRNNPEIVNRWECFYELSTKTPPN
LCEIATIHVQVLVEFTKKLPGFMRLDSHDQIALLKGCVVQAMLLRNSCGYNKVNRFLDLK
RVVRDTGIKEDHIRTLTDFFDNVAKLQMDETEYGLLIAIIVFDSDHTDLENRLTIDKYRD
RYLSALSRYSEAREPRRPQIFAKILSLLTEMRTLYHTHAKMVLDWKQREQLTPLLCEIWD
MR
Nucleotide sequence
Length: 1,124
>KH2012:KH.C2.161.v3.A.SL12-1
ATGCAAATACGGTGGAAAGTGTGAAATGGACATGTACACACGCCGAAAATGTCCTGAATG
TCGATTAAGAAAATGCAGGGCTGTTGGGATGTTAGAAGAATGTTTGTTGACTGAAATCCA
ATGCAAATCAAAAAGAAGAAGTAGGAAAGTGAAAACAATTCAAGAAGATGATGAAACAAA
AGAAAGTGTACCGAATCCGATCCCACCACCCAAACCCGCAGTTAAATCTCCACCAGAACC
AGATGAAACTGATTTATTAATTGAATTGGTTGGAAAAAGTTTCTCAGATTACCGGAATAA
TCCTGAGATAGTAAATCGTTGGGAATGTTTTTACGAATTGTCAACGAAAACGCCTCCGAA
TCTTTGTGAAATCGCTACCATTCACGTACAAGTGTTAGTAGAGTTCACCAAGAAGTTACC
AGGTTTCATGCGACTTGACTCACACGACCAGATAGCTTTACTGAAAGGTTGTGTTGTGCA
AGCAATGCTTCTACGAAACTCCTGTGGTTACAACAAGGTTAACAGATTCCTGGATCTAAA
ACGTGTTGTACGAGACACAGGTATAAAGGAAGACCATATTCGAACGCTCACTGATTTTTT
TGACAATGTTGCAAAACTTCAAATGGATGAAACCGAATACGGCTTGCTTATTGCCATCAT
TGTGTTTGACTCCGATCACACCGACCTTGAGAACAGACTTACCATTGACAAATATAGGGA
CCGGTACCTGTCCGCTCTCTCGCGTTACAGCGAGGCCCGTGAGCCGCGACGTCCTCAGAT
CTTCGCAAAAATCCTCTCTCTTCTTACAGAAATGCGAACACTGTATCACACCCACGCTAA
AATGGTCTTGGATTGGAAACAAAGGGAACAGCTGACACCTTTGCTTTGTGAGATTTGGGA
TATGCGGTGATCGGTTTCAGTCAATGCCCAGGAAAGGGCATCTTATTTTAACAGTTCTTT
TTCGGTCAACCCGTGCAGTAGATTAAGTATACACAATTGGCCCCATCCGAGCTTGCACCT
GACTATTGCTATATATGCTGATGTTTGGAATTTCCATGGTATAGTTCATCGTTGATTTTC
TTTTACTGGTATACGCACAATAAAGTATATATGGCTTTACTAAA
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[1-31] 1.3E-5 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[1-62] 6.2E-8 |
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[1-37] 8.684 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[26-36] 2.6E-20 - T[124-145] 2.6E-20 - T[145-161] 2.6E-20 - T[206-221] 2.6E-20 - T[263-280] 2.6E-20 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[28-44] 1.0E-6 - T[121-142] 1.0E-6 - T[147-166] 1.0E-6 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[115-300] 1.57E-52 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[117-279] 9.9E-24 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[123-275] 5.2E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NR1H3_HUMAN | 33.437 % | 172 | 1.58E-50 |
| NR1H2_HUMAN | 32.632 % | 110 | 1.65E-27 |
| NR1H4_HUMAN | 41.905 % | 227 | 3.17E-71 |