Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S1...' >
Transcript 'KH2012:KH.C2.198.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.198.v2.A.ND1-1

Possible name(s)

RPL3; RPL3L

Gene model

KH2012:KH.C2.198

Location

KhC2 [7,078,694 / 7,080,656]

Sequences

Amino acid sequence

Length: 326

>KH.C2.198.v2.A.ND1-1
PLPSSPTSLLSVLTDEPVWFPISSVFCLPPYPPPHHRYACKKKAFTKSCRKWQDEEGKRQ
IDRDFNQMKKYCKVIRVIAHTQMKLLPITQKKSHIMEIQVNGGTIPEKVDYARDLLEKPV
PVSNIFAKDEMIDIIGVNKGHGEKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVAYS
VARSGQKGYHHRTEVNKKIYRLGAGIHKEGGKLIKNNAATETDITDKSITPMGGFPHYGE
VKNDFVMIKGCCIGPKKRVLTLRKSLITHTKRAALEKINLKWIDTSSKFGHGRFQTHEEK
RAFMGPLKKDRLAAAAAAATTTTTTA

Nucleotide sequence

Length: 1,233

>KH2012:KH.C2.198.v2.A.ND1-1
GGGCGGTCTGATATAAAGTGCTGATTCGTCTTTTTTCTGATTTTACATTAGTTTACCAAA
AGTTCTTTAAATTCTATGATATTTTGGAACTCGTCTGGTCTGTGGTTAATCATGTGTATA
CCATGTAGTTTTCAATCATGATTTCTAACCAAACTTTCCCATTCTGCTCCTCTCAGTAAT
TCATCTGACGAGCTTCGAATGCCTGGATGCGATAAGTGGATGTGCCATAGACAACCATGT
CTGGTCGCGTAACCACTTCCATCCTCTCCCACTAGTCTCCTCTCAGTGTTAACTGATGAG
CCGGTGTGGTTTCCCATCTCATCTGTCTTTTGTCTCCCTCCCTACCCCCCACCCCACCAT
AGGTACGCATGCAAAAAGAAGGCCTTCACCAAATCGTGCCGAAAATGGCAAGACGAAGAA
GGCAAGCGTCAAATCGACCGCGATTTCAACCAGATGAAGAAATACTGCAAAGTGATCCGT
GTTATCGCACACACCCAGATGAAACTTCTCCCAATCACCCAGAAGAAGTCCCACATCATG
GAGATCCAAGTGAATGGTGGAACCATTCCAGAGAAGGTTGACTACGCACGAGACTTGCTG
GAGAAACCAGTCCCAGTCTCAAACATTTTCGCCAAGGATGAAATGATTGATATCATTGGT
GTGAACAAGGGGCATGGAGAGAAAGGTGTTACTTCTCGTTGGCATACAAAGAAACTTCCA
CGAAAAACCCACAAGGGTTTGAGAAAGGTTGCTTGTATTGGTGCGTGGCATCCAGCCAGA
GTTGCTTATTCTGTTGCAAGATCAGGTCAAAAGGGTTACCATCACCGAACTGAGGTGAAC
AAGAAGATCTACAGATTAGGAGCTGGTATCCATAAAGAGGGTGGCAAGCTCATTAAGAAC
AATGCTGCTACTGAGACTGATATTACAGATAAGAGCATCACCCCTATGGGAGGTTTCCCC
CATTATGGTGAGGTAAAGAACGACTTTGTGATGATCAAAGGTTGTTGTATTGGACCTAAA
AAGCGAGTGCTTACCCTTCGGAAGTCACTGATCACACACACCAAACGTGCAGCTCTGGAG
AAAATCAATTTGAAATGGATCGACACGTCATCAAAGTTCGGGCATGGTCGTTTCCAAACA
CACGAGGAGAAACGTGCCTTCATGGGACCGCTCAAGAAGGATCGTCTCGCCGCCGCTGCT
GCTGCCGCTACCACAACCACAACCACCGCTTAA

InterProScan

Pfam	Ribosomal_L3 (IPR000597) - T[38-290] 1.3E-110
SUPERFAMILY	Transl_B-barrel_sf (IPR009000) - T[41-290] 6.62E-68

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL3_HUMAN	73.665 %	450	3.09E-159
RL3L_HUMAN	71.691 %	417	6.13E-146