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  1. Clone 'cima025d21'
  2. Transcript 'KH2012:KH.L41.13.v1....'
  3. Transcript 'KH2012:KH.C7.576.v1....'
  4. Transcript 'KH2012:KH.L9.21.v2.B...'
  5. Transcript 'KH2012:KH.C2.209.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.209.v1.A.SL1-1

Possible name(s)

CALM1; CALM3; CALML3

Location

KhC2 [4,725,672 / 4,731,223]

Sequences

Amino acid sequence

Length: 276

>KH.C2.209.v1.A.SL1-1
SVVNFYYALEMAQEKSRQYKRRLRDKIRYCSNVSILSTLSVGSEGNWKMRVPSLRASQLP
EELLEVYEEAFYLLDPNDTGAIGAREVGIVMRALGQEPTDEEIQNLIQEVDRSSTGSLTF
NDFLAFLAHICQDEDPDEEWESVFKRFDRNGKSTEGAREVGIVMRALGQEPTDEEIQNLI
QEVDRSSTGSLTFNDFLAFLAHICQDEDPDEEWESVFKRFDRNGDGYIDENDLRKSLIEL
RLKFTDADIEEMICEFLPPNAKVRRLDFDDFINIVA

Nucleotide sequence

Length: 1,767

>KH2012:KH.C2.209.v1.A.SL1-1
ATTAATTGCAGTTCAATTAAATTTAATCTGTGGTTAATTTTTATTACGCCCTCGAGATGG
CGCAAGAGAAGTCGCGACAATACAAGCGGAGACTTCGGGATAAGATTCGTTACTGCAGCA
ATGTTAGCATCCTAAGCACTCTCAGCGTTGGTTCGGAAGGCAACTGGAAAATGAGAGTTC
CCTCTCTTCGAGCAAGTCAGCTGCCAGAGGAATTGTTAGAGGTTTACGAAGAAGCTTTCT
ATTTGTTAGATCCAAACGATACGGGCGCCATCGGCGCTAGAGAGGTAGGCATCGTCATGC
GAGCGCTTGGGCAAGAACCAACCGATGAAGAAATACAGAACCTTATACAAGAAGTTGACC
GGAGTTCCACGGGTTCGCTCACTTTTAACGACTTTCTAGCTTTCCTCGCCCATATTTGCC
AGGACGAAGACCCCGACGAAGAATGGGAATCTGTGTTTAAAAGATTTGATAGAAACGGTA
AGTCGACTGAGGGCGCTAGAGAGGTAGGCATCGTCATGCGAGCGCTTGGGCAAGAACCAA
CCGATGAAGAAATACAGAACCTTATACAAGAAGTTGACCGGAGTTCCACGGGTTCGCTCA
CTTTTAACGACTTTCTAGCTTTCCTCGCCCATATTTGCCAGGACGAAGACCCCGACGAAG
AATGGGAATCTGTGTTTAAAAGATTTGATAGAAACGGTGACGGATATATTGACGAAAATG
ACCTGCGCAAGTCTTTAATAGAACTCAGACTTAAATTTACCGACGCCGACATTGAAGAAA
TGATTTGCGAATTTTTGCCTCCTAACGCCAAAGTGCGAAGGCTTGATTTTGATGACTTTA
TTAACATAGTTGCGTAACACACATATATATATATATGATTGTTGTGGTGCATGGCAGGAC
TGCATTCTATTTAAATCAACACCGTGCTTACTGCTATCACAATTATTCCATTTGTTTGAG
AAATTGTTGTTGAAGAAGGACTGACTTCTTTGAGGCGTTTATTAATGAGATTGTGACCAT
AAATTAATATGTTGGTTTTAACTGTTAGTTGGCGTTCTTCTCCTTTAAATTAATGCATCA
GTCTAATGCATTGTTACGCTGCTAGCAGATTCTTACATTCAAACATAATATTGTATAACC
TTAATGTTCAGACGAATTCTACCAAACATGTACCTTGTATTCTTATTTTTGGTGCTTCTT
ACTTTAATGCAATCTTCAATTTTCAGCTTTGCGCTTTCATAACGCGTGTTCATAATACAA
TGCAAATGTTGCATAAGTCCATACTTTAAACTTTTTATCTTTTTATGAACTCGTATATTT
TAGAAGCAACAAATAGAAACGCTCATGGTATATATACTTCTGCATCTATACTAGTTAAAT
TAATTTTTGGCTTCAGTGCTACATATTGGTGTTAATTTGTTTTTATTTCTGCTGGTCACT
ATAAGACACTGATATATAGTAGGGGTGGGGAAAGATGGGACGCGTTTTCATTCTATATTT
TTTCCAAATTGGTAGTAAACAAAAACATTTAAAGAATTATAAAACCGTTTCCCCACGATA
TACCCTTGTTAATTGTTTAAAACCTGATCAGGATGTTTGAATATTATGTGCTAAAGGTGT
CCCGTCTTCCTCCACTGTACAATATACATCAAATTTCAGACACCTTTGTCGCAGTAAGCA
TGTCACAAGCATTTTGTTATGATTTTTTTATCGTAAAAAATATGACAGAAACACTGACAG
TGGCCAATAAAGGAATGCGAAAACGAA

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[54-202] 5.16E-32 - T[166-275] 2.78E-20
ProSiteProfiles
EF_hand_dom (IPR002048) - T[62-97] 9.939 - T[98-133] 11.054 - T[135-170] 8.265 - T[171-206] 11.054 - T[208-243] 14.29
Pfam
EF_hand_dom (IPR002048) - T[66-127] 1.1E-9 - T[164-202] 1.3E-5 - T[212-237] 1.3E-6
SMART
EF_hand_dom (IPR002048) - T[66-94] 18.0 - T[102-130] 0.14 - T[139-167] 41.0 - T[175-203] 0.14 - T[212-240] 0.002
CDD
EF_hand_dom (IPR002048) - T[67-128] 2.53422E-9
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[75-87] . - T[111-123] . - T[184-196] . - T[221-233] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CALM1_HUMAN 38.356 % 111 1.37E-30
CALM3_HUMAN 38.356 % 111 1.37E-30
CALM2_HUMAN 38.356 % 111 1.37E-30





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