- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C2.233.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.233.v1.R.ND1-1
Possible name(s)
FEZF2; GFI1; GFI1B
Gene model
Location
KhC2 [7,220,795 / 7,224,467]
Amino acid sequence
Length: 418
>KH.C2.233.v1.R.ND1-1
METIRMNTDLQTQPLCLSMKPKYVDSTLRKQVEMTKQFQHENEPVLYPRMNKFKAEILTF
KNSKDIGEPKPRITDPAAENGHRDCYSRQTSSESSSPAGNQDRESGQSSIESPISMKGES
GWGRQQETNKTNFNHKTFSTSPSSSGSKDLWRPPVEALNSTGKVGHVEPPRQKRPKLSTL
GTAMMPEWNNYALQQLIAKTQLLRFPTIYNAHAQWQQNVQQSTYENNKVPPPQMMNLHHF
AQAQNISSFLRAFPFYSDFTTAHGLEVHGRRAHSGDRTFNCDVCSKSFGHAVTLGQHKAS
HNREKVFECHICHKTFKRSSTLSTHLLIHSDTRPFPCPYCGKRFHQKSDMKKHTFIHTGE
KPHKCRICGKAFSQSSNLITHMRKHTGYKPFACDACDRAFQRKVDLRRHKESQHNVKQ
Nucleotide sequence
Length: 1,257
>KH2012:KH.C2.233.v1.R.ND1-1
ATGGAAACGATAAGGATGAACACTGATTTGCAAACGCAGCCTCTCTGCTTATCTATGAAG
CCAAAGTACGTTGATTCTACTCTGCGGAAGCAAGTTGAGATGACGAAACAGTTTCAACAT
GAAAATGAACCCGTACTCTACCCTCGCATGAACAAGTTTAAGGCAGAAATTCTTACTTTC
AAAAACTCAAAGGACATCGGTGAACCGAAGCCCCGAATCACGGACCCCGCTGCGGAAAAT
GGACACCGCGATTGCTACAGCAGACAAACATCGAGCGAGTCAAGCTCGCCGGCGGGAAAT
CAAGACAGAGAGTCCGGCCAGTCGTCGATCGAATCTCCAATCTCTATGAAAGGCGAAAGT
GGATGGGGAAGGCAACAGGAAACAAACAAAACTAATTTCAATCACAAGACTTTTTCAACT
TCCCCATCAAGTTCAGGAAGCAAAGATCTTTGGCGGCCCCCAGTGGAAGCCTTAAATTCA
ACCGGAAAAGTTGGCCACGTCGAACCCCCGCGTCAAAAACGTCCGAAACTTTCAACCCTC
GGTACAGCAATGATGCCGGAATGGAACAATTATGCGCTGCAACAATTAATCGCAAAAACT
CAACTCTTGAGGTTTCCCACTATCTACAATGCGCATGCGCAGTGGCAGCAAAATGTACAG
CAGAGCACGTACGAAAATAACAAAGTCCCTCCCCCGCAAATGATGAATTTACATCACTTT
GCGCAAGCTCAAAATATTTCTTCGTTCCTTCGAGCCTTTCCATTTTATTCAGACTTTACT
ACAGCGCATGGATTAGAGGTCCACGGTAGACGAGCGCATTCAGGTGATCGAACATTCAAC
TGTGACGTTTGCAGCAAATCCTTTGGCCATGCTGTAACTCTGGGTCAGCATAAGGCAAGC
CATAATAGGGAAAAGGTATTCGAATGCCATATCTGCCACAAAACCTTCAAACGTTCGTCT
ACTTTATCCACCCACCTCCTAATACACAGTGATACTCGTCCCTTCCCATGTCCTTACTGT
GGGAAGAGGTTTCACCAAAAGTCAGACATGAAGAAACATACCTTCATACATACAGGTGAG
AAGCCGCACAAATGTCGTATTTGTGGAAAGGCCTTCAGTCAGAGCTCCAATCTCATTACT
CACATGCGAAAACACACGGGTTACAAACCCTTTGCCTGTGATGCTTGCGACCGCGCTTTC
CAAAGAAAAGTTGACCTTAGGCGGCACAAGGAATCACAGCATAACGTTAAACAATAA
| PANTHER |
Gfi-1b (IPR037044) - T[259-417] 2.2E-95 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[273-325] 4.69E-13 - T[315-372] 1.87E-19 - T[357-409] 2.45E-19 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[279-306] 11.655 - T[307-334] 13.713 - T[335-362] 15.937 - T[363-390] 16.228 - T[391-418] 11.614 |
| SMART |
Znf_C2H2_type (IPR013087) - T[279-301] 0.16 - T[307-329] 0.021 - T[335-357] 0.0013 - T[363-385] 1.3E-4 - T[391-414] 0.015 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[281-301] . - T[309-329] . - T[337-357] . - T[365-385] . - T[393-414] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GFI1B_HUMAN | 75.472 % | 268 | 3.39E-87 |
| GFI1_HUMAN | 76.73 % | 271 | 3.39E-87 |
| FEZF2_HUMAN | 48.611 % | 147 | 1.14E-39 |