- Region 'REG00001014' >
- Transcript 'KH2012:KH.S522.3.v1....' >
- Transcript 'KH2012:KH.C3.17.v2.R...' >
- Transcript 'KH2012:KH.C2.249.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.249.v1.A.ND1-1
Possible name(s)
CNGA1; CNGA2; CNGA3
Gene model
Location
KhC2 [2,434,417 / 2,436,941]
Amino acid sequence
Length: 274
>KH.C2.249.v1.A.ND1-1
FRAVSKTLQKRVIKWFDYLWTNKKSTDEQAILGLLPDTLRAEIAISVHLETLKRVSIFQD
CEPGLLIELVLKLRPQVFSPGDYVCRKGDVGKEMYIVKEGKLGVVGDDGITQYAVLGDGA
YFGEISILNISGNKTGNRRTANVRSIGYTDLFCLSKDDLLEVLSEYPGAKSVLEEKGRRM
LMKDGLVNQQDGEDTAGLDEQAALQRVEEMERRFGKLQTKFSRMMAEYASSQKRLKKRIN
VLETRLGNGATDSASEEDDIIPLVSSNSLQVRKQ
Nucleotide sequence
Length: 1,142
>KH2012:KH.C2.249.v1.A.ND1-1
AATAATCACAAAATTCAACCCAAATAGTAATCATGCCCAAAGTAACATACTTGGGAACTC
GTAAGCTGGCACGAGGTGTATGTAACTAAACACCCGTGTTTAAGACTGTCGTTTCCCAGC
CACGCGAAGATAAAGTAAACAATTACACAAATTCCTATCGTAAACCATAAGCTAAACTTG
TCTTTCCCATCAATGTAGTTCAGGGCAGTAAGTAAGACTCTTCAGAAGAGAGTAATCAAG
TGGTTTGATTACCTGTGGACGAACAAGAAGTCAACCGACGAACAAGCGATCTTAGGTTTG
CTGCCCGACACTCTTCGAGCAGAAATTGCTATCAGTGTTCATCTGGAAACTTTAAAAAGA
GTCAGCATCTTTCAGGATTGCGAACCTGGATTGTTGATCGAGTTGGTATTAAAACTTCGG
CCACAAGTTTTCAGCCCGGGAGATTATGTATGTAGAAAGGGTGATGTCGGGAAAGAGATG
TATATCGTGAAAGAAGGTAAGCTTGGCGTGGTAGGTGACGATGGTATAACGCAATATGCG
GTGCTGGGAGATGGAGCATACTTTGGAGAGATCAGTATTTTAAACATTAGTGGAAACAAA
ACTGGAAACAGAAGAACAGCGAATGTCCGTAGTATTGGATATACTGATTTGTTCTGTCTA
TCAAAAGATGACTTGCTTGAAGTATTATCAGAATACCCAGGTGCAAAATCTGTACTTGAG
GAGAAAGGACGAAGGATGTTGATGAAAGATGGATTGGTGAACCAACAAGACGGAGAGGAT
ACTGCAGGGTTGGACGAGCAAGCTGCTTTGCAAAGAGTTGAAGAAATGGAAAGAAGGTTT
GGCAAGTTGCAAACAAAGTTTTCGAGAATGATGGCTGAATATGCGTCATCACAGAAAAGA
CTCAAGAAAAGAATTAATGTACTTGAAACACGACTCGGTAATGGTGCTACAGATTCCGCA
TCAGAAGAAGATGATATTATTCCGCTGGTTTCGAGTAATAGCCTTCAAGTTCGGAAGCAG
TGAAATGAGAAACCCGTGTATGATAAGTTATATTGAGGTTATGTTCTGAGGCCTTGTAAC
TGTGCCAACTCGGCCAGGAGGACGATGGCTTGGATTTGCTACTGAGAACCGTGTTGTACA
AG
| PANTHER |
CNGA1 (IPR032945) - T[1-248] 1.8E-122 |
| SUPERFAMILY |
cNMP-bd-like (IPR018490) - T[2-172] 3.14E-44 |
| Gene3D |
RmlC-like_jellyroll (IPR014710) - T[50-180] 2.8E-38 |
| CDD |
cNMP-bd_dom (IPR000595) - T[57-167] 1.5877E-26 |
| SMART |
cNMP-bd_dom (IPR000595) - T[57-181] 4.6E-24 |
| ProSiteProfiles |
cNMP-bd_dom (IPR000595) - T[57-163] 23.756 |
| Pfam |
cNMP-bd_dom (IPR000595) - T[76-166] 1.7E-19 |
| ProSitePatterns |
cNMP-bd_CS (IPR018488) - T[84-100] . - T[122-145] . |
| Pfam |
CLZ_dom (IPR032406) - T[173-244] 1.3E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CNGA3_HUMAN | 62.651 % | 342 | 6.0E-114 |
| CNGA1_HUMAN | 64.634 % | 342 | 8.89E-114 |
| CNGA2_HUMAN | 62.302 % | 336 | 8.98E-112 |