- Transcript 'KH2012:KH.C2.257.v2....' >
- Transcript 'KH2012:KH.C1.144.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L132.19.v1...' >
- Transcript 'KH2012:KH.C2.249.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.249.v2.A.SL2-1
Possible name(s)
CNGA1; CNGA2; CNGA3
Gene model
Location
KhC2 [2,430,428 / 2,436,941]
Amino acid sequence
Length: 687
>KH.C2.249.v2.A.SL2-1
KGIMPNKVVPMRNVPSESRSRDVELDIPVVTISRTVSSMGDLTDDQEFSCDSHTTTRTQD
PEASECGSDRSRSGVFTRLAASIVKVNKWLKIIRPSTPEETKDEMIAKIQGPPMPTTPTT
PRNPSTSRDNKTSDQATPKKKTKTKHWVIDPAEGFYFWWLMIITLAVFYNMCFVIARSCF
HDLQRQNYLVWLTFDYAADIVYVFDMVVRQKTGFFEQGLLVKDKARLRKAYRSSYQFYVD
VISILPTDLGYIFFGIHQLELRFNRVLRFSRMFECFERVETRTTYPNLFRISILVFYILI
IIHWNACIFYAISRAIGFGSDGWVYPDPAIVPFDTLSRKYVYSLYWSTLTLTTIGETPMP
EKDIEYLFQVFDFLVGVLIFATIVGNVGSMISNMNAARSEFQGKMDSIKQYMQFRAVSKT
LQKRVIKWFDYLWTNKKSTDEQAILGLLPDTLRAEIAISVHLETLKRVSIFQDCEPGLLI
ELVLKLRPQVFSPGDYVCRKGDVGKEMYIVKEGKLGVVGDDGITQYAVLGDGAYFGEISI
LNISGNKTGNRRTANVRSIGYTDLFCLSKDDLLEVLSEYPGAKSVLEEKGRRMLMKDGLV
NQQDGEDTAGLDEQAALQRVEEMERRFGKLQTKFSRMMAEYASSQKRLKKRINVLETRLG
NGATDSASEEDDIIPLVSSNSLQVRKQ
Nucleotide sequence
Length: 2,258
>KH2012:KH.C2.249.v2.A.SL2-1
CTAACACAGATTTTAGTGTAATGCAACCGGTTAAACATAGTATAATCTAACTTTAAGACA
TCTTGGAAAGTTTAAAAAGGAATAATGCCAAACAAAGTGGTTCCGATGAGAAACGTACCC
TCAGAGTCACGTTCTCGAGATGTGGAACTTGATATTCCAGTTGTAACGATATCACGAACT
GTTTCAAGCATGGGTGATTTGACAGATGATCAAGAATTTTCATGTGACTCTCATACGACT
ACCAGAACACAAGATCCGGAAGCGTCCGAATGTGGAAGCGATCGATCCCGGTCTGGAGTA
TTCACCCGTCTCGCAGCATCAATAGTAAAAGTAAACAAATGGCTCAAGATTATCAGACCC
TCAACACCAGAAGAGACCAAAGATGAAATGATAGCAAAGATCCAAGGTCCTCCGATGCCA
ACGACACCAACAACGCCACGAAATCCGTCCACTTCACGGGATAATAAAACAAGTGACCAG
GCAACACCGAAGAAAAAAACGAAGACGAAACACTGGGTTATTGATCCTGCTGAGGGTTTC
TATTTCTGGTGGCTGATGATTATCACACTCGCAGTGTTTTACAACATGTGCTTTGTCATT
GCAAGATCCTGTTTCCACGACTTACAAAGGCAGAACTATCTCGTTTGGTTGACATTTGAC
TATGCCGCAGATATTGTTTACGTCTTCGATATGGTGGTTCGACAGAAAACAGGTTTCTTT
GAGCAAGGCCTGTTGGTAAAAGATAAAGCACGGCTTCGGAAAGCTTACAGAAGTAGCTAC
CAATTCTACGTGGACGTAATCTCTATTTTACCAACAGATCTAGGTTACATTTTCTTCGGA
ATACATCAGCTCGAACTCAGGTTCAACAGAGTTCTTCGATTTTCGAGAATGTTTGAATGT
TTTGAGAGGGTAGAGACACGAACTACGTATCCAAATCTCTTCCGAATATCAATCCTTGTG
TTTTATATTCTTATTATCATTCATTGGAATGCTTGCATCTTTTACGCCATTTCTAGAGCA
ATCGGCTTTGGCTCTGATGGCTGGGTCTATCCGGATCCGGCAATAGTTCCATTCGATACG
CTATCCAGAAAATACGTGTACAGTCTGTATTGGTCGACGCTTACCTTGACAACGATTGGT
GAAACACCAATGCCCGAGAAAGACATTGAATATTTATTTCAAGTATTCGATTTCTTGGTT
GGCGTGTTGATTTTCGCTACCATTGTCGGTAACGTTGGCTCTATGATCAGTAACATGAAC
GCTGCACGTTCCGAGTTTCAAGGAAAGATGGATTCTATCAAGCAATACATGCAGTTCAGG
GCAGTAAGTAAGACTCTTCAGAAGAGAGTAATCAAGTGGTTTGATTACCTGTGGACGAAC
AAGAAGTCAACCGACGAACAAGCGATCTTAGGTTTGCTGCCCGACACTCTTCGAGCAGAA
ATTGCTATCAGTGTTCATCTGGAAACTTTAAAAAGAGTCAGCATCTTTCAGGATTGCGAA
CCTGGATTGTTGATCGAGTTGGTATTAAAACTTCGGCCACAAGTTTTCAGCCCGGGAGAT
TATGTATGTAGAAAGGGTGATGTCGGGAAAGAGATGTATATCGTGAAAGAAGGTAAGCTT
GGCGTGGTAGGTGACGATGGTATAACGCAATATGCGGTGCTGGGAGATGGAGCATACTTT
GGAGAGATCAGTATTTTAAACATTAGTGGAAACAAAACTGGAAACAGAAGAACAGCGAAT
GTCCGTAGTATTGGATATACTGATTTGTTCTGTCTATCAAAAGATGACTTGCTTGAAGTA
TTATCAGAATACCCAGGTGCAAAATCTGTACTTGAGGAGAAAGGACGAAGGATGTTGATG
AAAGATGGATTGGTGAACCAACAAGACGGAGAGGATACTGCAGGGTTGGACGAGCAAGCT
GCTTTGCAAAGAGTTGAAGAAATGGAAAGAAGGTTTGGCAAGTTGCAAACAAAGTTTTCG
AGAATGATGGCTGAATATGCGTCATCACAGAAAAGACTCAAGAAAAGAATTAATGTACTT
GAAACACGACTCGGTAATGGTGCTACAGATTCCGCATCAGAAGAAGATGATATTATTCCG
CTGGTTTCGAGTAATAGCCTTCAAGTTCGGAAGCAGTGAAATGAGAAACCCGTGTATGAT
AAGTTATATTGAGGTTATGTTCTGAGGCCTTGTAACTGTGCCAACTCGGCCAGGAGGACG
ATGGCTTGGATTTGCTACTGAGAACCGTGTTGTACAAG
| Pfam |
Ion_trans_dom (IPR005821) - T[157-397] 2.2E-29 |
| SUPERFAMILY |
cNMP-bd-like (IPR018490) - T[397-585] 7.07E-49 |
| Gene3D |
RmlC-like_jellyroll (IPR014710) - T[463-593] 1.7E-37 |
| CDD |
cNMP-bd_dom (IPR000595) - T[470-580] 3.23719E-25 |
| SMART |
cNMP-bd_dom (IPR000595) - T[470-594] 4.6E-24 |
| ProSiteProfiles |
cNMP-bd_dom (IPR000595) - T[470-576] 23.756 |
| Pfam |
cNMP-bd_dom (IPR000595) - T[489-579] 8.4E-19 |
| ProSitePatterns |
cNMP-bd_CS (IPR018488) - T[497-513] . - T[535-558] . |
| Pfam |
CLZ_dom (IPR032406) - T[586-657] 5.4E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CNGA3_HUMAN | 63.178 % | 711 | 0 |
| CNGA1_HUMAN | 64.453 % | 701 | 0 |
| CNGA2_HUMAN | 56.082 % | 719 | 0 |