Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.257.v2.A.nonSL3-1

Possible name(s)

RPS26

Gene model

KH2012:KH.C2.257

Location

KhC2 [513,257 / 515,712]

Sequences

Amino acid sequence

Length: 138

>KH.C2.257.v2.A.nonSL3-1
GKVKFSEKKFSFCYFYFRKMPFKRRNGGRNKQGRGHVKYVRCESSGARVPKDKAIKKYII
RNIVDAAGMRDLSEASVYESYALPKMYYKVYYSVSAAIHLRLVKNRSRLARKDRTPPPRF
RPGGQQQQQQNQTRPRVS

Nucleotide sequence

Length: 625

>KH2012:KH.C2.257.v2.A.nonSL3-1
ACAGCTTGAGTTTCAACCTTCCTTTGGTTTGCAGGTTTGCGTCGGTATGTTGGTTTTACT
TTATCCAAATTAATCAAGCTTTGATTGTAATATTTGGTATTGAATTTTAAGGAAAGGTAA
AATTCAGCGAAAAAAAGTTTAGTTTTTGCTATTTTTATTTTAGAAAAATGCCTTTCAAGA
GACGAAATGGCGGTCGGAATAAGCAAGGACGCGGTCATGTAAAATACGTTCGTTGCGAGT
CTTCTGGCGCTAGGGTGCCAAAAGACAAAGCAATTAAGAAATACATCATCAGGAACATCG
TTGATGCTGCTGGGATGAGAGATTTATCTGAAGCAAGTGTTTACGAATCTTACGCCTTGC
CAAAGATGTACTATAAAGTCTACTATAGTGTTTCTGCTGCTATTCATTTAAGATTGGTGA
AGAACAGATCTCGGCTTGCACGTAAGGATCGCACACCACCACCAAGGTTCAGGCCAGGTG
GTCAACAACAGCAACAACAGAATCAAACACGTCCACGCGTTTCATAAGTGATGTGAAATA
AATTAAGTGGATCAAATTTGATGGTTTTAATATTTAGTCTGTAAACACCGGCTGTACTTT
CGTGTAAAAAGATGCATCTAACAAA

InterProScan

Pfam	Ribosomal_S26e (IPR000892) - T[20-126] 4.7E-48
Gene3D	Ribosomal_S26e_sf (IPR038551) - T[20-126] 1.5E-43
PANTHER	Ribosomal_S26e (IPR000892) - T[20-132] 5.3E-51

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS26_HUMAN	65.347 %	143	2.65E-45
RS26L_HUMAN	60.396 %	132	4.53E-41