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  1. Transcript 'Moocci.CG.ELv1_2.S36...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'KH2012:KH.C2.288.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.288.v1.A.ND1-1

Possible name(s)

FTSJ1; FTSJ3; MRM2

Location

KhC2 [1,838,208 / 1,840,996]

Sequences

Amino acid sequence

Length: 326

>KH.C2.288.v1.A.ND1-1
FNFAMGRTSKDKRDVYYRLAKEQGWRARSAFKLLHLDEEFNLFHNGVKKVVDLCAAPGSW
SQVLSRKLRGTEVENNKDVKIVAVDLQAMADLPGVIQLQGDITNVSTAQSIISHFEGESA
DLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKLGGTFVAKIFRGKDVTLLYAQL
RLFFKKVTCAKPRSSRNSSIEAFVVCENYSPPPSYIPNMSNPLLDMNYDLYANQLEGPNR
VIAPFLACGDLSGFDSDRTYKLQLDGAEEYKYHPPTQSPINPPYKHACHLKSESKLAKET
IAVAEEVATVEKTVKNLTLENCENNT

Nucleotide sequence

Length: 1,397

>KH2012:KH.C2.288.v1.A.ND1-1
GTTCTGTAGGCCAATCCAGCATTCCTCTGCGTGTTAAAAGCCCACCGGGTTCCTTTGGAA
GCCACCTGGCACCAACGGGCGTTTATTAGTGACATACACACGGCTCTATTTTCTGAATTA
AGGTTTGCTGGATAGATACTTCTATTTCTGATTTAATTTTGCTATGGGAAGAACGTCTAA
AGACAAACGCGATGTGTATTACCGTTTAGCCAAAGAGCAAGGTTGGAGAGCAAGAAGTGC
GTTTAAGTTGCTTCATTTAGATGAAGAATTTAATCTTTTCCACAATGGAGTTAAGAAAGT
CGTTGATCTGTGTGCTGCCCCTGGTAGTTGGAGTCAAGTGTTATCAAGAAAACTTCGAGG
TACAGAAGTGGAAAATAACAAAGATGTTAAAATAGTAGCAGTTGATCTGCAAGCAATGGC
TGATTTGCCAGGAGTGATACAACTGCAAGGAGACATTACAAATGTATCGACAGCACAATC
AATTATCTCACATTTTGAGGGAGAGTCAGCTGACCTAGTGGTCTGTGATGGAGCACCTGA
TGTTACTGGTCTTCATGATATTGATGAATACATTCAAGCCCAGCTTCTACTTGCTGCATT
AAACATTACCACACATGTTTTGAAGCTTGGCGGAACATTTGTTGCTAAAATATTCCGAGG
CAAAGATGTTACATTGCTGTATGCTCAACTTCGATTATTTTTTAAAAAAGTAACCTGTGC
AAAACCCAGAAGCTCAAGGAACTCTAGCATTGAAGCTTTTGTTGTATGTGAAAACTACAG
CCCACCTCCCAGTTATATTCCAAACATGTCCAACCCACTCCTGGACATGAATTATGACTT
GTATGCGAACCAATTAGAAGGTCCTAACCGAGTGATCGCACCTTTCTTAGCATGTGGTGA
TCTTAGTGGATTTGATTCAGACAGAACTTACAAATTACAGCTTGATGGTGCTGAAGAGTA
CAAGTACCATCCACCAACACAATCCCCAATTAATCCTCCATATAAGCATGCATGTCACTT
GAAATCTGAATCAAAGTTGGCCAAAGAAACGATAGCGGTTGCAGAAGAAGTGGCTACCGT
GGAGAAAACTGTTAAAAACTTGACTTTGGAAAACTGTGAAAATAACACATAGATACATCA
ACAATTAGTTACGATTTAATTGATATTATCTTATACATTCTTAATGATAATATTATTCCA
AGTGGTTTTTAAGCCCCGAGATGTGATTTGAAATGAGAAATCAAAAGTGAGTTTACGCAA
TCATCTAGTTTTCGTATCAAAATTTAAATTAATTTTGTGCGCTTTGGTTAAGTTGTATAG
ATAACAGTTTTATATAAGCATCTTTATGGTTAATACTCTCTCTGGAGTCTTGCACAATAA
AGCAATCATTGTTTTCA

InterProScan

PANTHER
RNA_methyltr_E_Trm7 (IPR028590) - T[5-306] 1.7E-142
Hamap
RNA_methyltr_E_Trm7 (IPR028590) - T[5-260] 33.559
Hamap
rRNA-MeTfrase_E (IPR015507) - T[9-210] 32.638
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[24-209] 2.84E-36
Pfam
rRNA_MeTrfase_FtsJ_dom (IPR002877) - T[25-209] 1.3E-68

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM7_HUMAN 66.562 % 417 2.59E-147
SPB1_HUMAN 37.788 % 151 8.61E-41
MRM2_HUMAN 34.483 % 115 2.51E-30