- Transcript 'KH2012:KH.C6.115.v2....' >
- Transcript 'Moocul.CG.ELv1_2.S93...' >
- Transcript 'Cisavi.CG.ENS81.R1.5...' >
- Molecular Tool 'Ci-Tbx6b-MO (Yagi's 25mer MO)' >
- Transcript 'KH2012:KH.C2.288.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.288.v1.A.nonSL7-1
Possible name(s)
FTSJ1; FTSJ3; MRM2
Gene model
Location
KhC2 [1,838,208 / 1,840,903]
Amino acid sequence
Length: 326
>KH.C2.288.v1.A.nonSL7-1
FNFAMGRTSKDKRDVYYRLAKEQGWRARSAFKLLHLDEEFNLFHNGVKKVVDLCAAPGSW
SQVLSRKLRGTEVENNKDVKIVAVDLQAMADLPGVIQLQGDITNVSTAQSIISHFEGESA
DLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKLGGTFVAKIFRGKDVTLLYAQL
RLFFKKVTCAKPRSSRNSSIEAFVVCENYSPPPSYIPNMSNPLLDMNYDLYANQLEGPNR
VIAPFLACGDLSGFDSDRTYKLQLDGAEEYKYHPPTQSPINPPYKHACHLKSESKLAKET
IAVAEEVATVEKTVKNLTLENCENNT
Nucleotide sequence
Length: 1,304
>KH2012:KH.C2.288.v1.A.nonSL7-1
ATACACACGGCTCTATTTTCTGAATTAAGGTTTGCTGGATAGATACTTCTATTTCTGATT
TAATTTTGCTATGGGAAGAACGTCTAAAGACAAACGCGATGTGTATTACCGTTTAGCCAA
AGAGCAAGGTTGGAGAGCAAGAAGTGCGTTTAAGTTGCTTCATTTAGATGAAGAATTTAA
TCTTTTCCACAATGGAGTTAAGAAAGTCGTTGATCTGTGTGCTGCCCCTGGTAGTTGGAG
TCAAGTGTTATCAAGAAAACTTCGAGGTACAGAAGTGGAAAATAACAAAGATGTTAAAAT
AGTAGCAGTTGATCTGCAAGCAATGGCTGATTTGCCAGGAGTGATACAACTGCAAGGAGA
CATTACAAATGTATCGACAGCACAATCAATTATCTCACATTTTGAGGGAGAGTCAGCTGA
CCTAGTGGTCTGTGATGGAGCACCTGATGTTACTGGTCTTCATGATATTGATGAATACAT
TCAAGCCCAGCTTCTACTTGCTGCATTAAACATTACCACACATGTTTTGAAGCTTGGCGG
AACATTTGTTGCTAAAATATTCCGAGGCAAAGATGTTACATTGCTGTATGCTCAACTTCG
ATTATTTTTTAAAAAAGTAACCTGTGCAAAACCCAGAAGCTCAAGGAACTCTAGCATTGA
AGCTTTTGTTGTATGTGAAAACTACAGCCCACCTCCCAGTTATATTCCAAACATGTCCAA
CCCACTCCTGGACATGAATTATGACTTGTATGCGAACCAATTAGAAGGTCCTAACCGAGT
GATCGCACCTTTCTTAGCATGTGGTGATCTTAGTGGATTTGATTCAGACAGAACTTACAA
ATTACAGCTTGATGGTGCTGAAGAGTACAAGTACCATCCACCAACACAATCCCCAATTAA
TCCTCCATATAAGCATGCATGTCACTTGAAATCTGAATCAAAGTTGGCCAAAGAAACGAT
AGCGGTTGCAGAAGAAGTGGCTACCGTGGAGAAAACTGTTAAAAACTTGACTTTGGAAAA
CTGTGAAAATAACACATAGATACATCAACAATTAGTTACGATTTAATTGATATTATCTTA
TACATTCTTAATGATAATATTATTCCAAGTGGTTTTTAAGCCCCGAGATGTGATTTGAAA
TGAGAAATCAAAAGTGAGTTTACGCAATCATCTAGTTTTCGTATCAAAATTTAAATTAAT
TTTGTGCGCTTTGGTTAAGTTGTATAGATAACAGTTTTATATAAGCATCTTTATGGTTAA
TACTCTCTCTGGAGTCTTGCACAATAAAGCAATCATTGTTTTCA
| PANTHER |
RNA_methyltr_E_Trm7 (IPR028590) - T[5-306] 1.7E-142 |
| Hamap |
RNA_methyltr_E_Trm7 (IPR028590) - T[5-260] 33.559 |
| Hamap |
rRNA-MeTfrase_E (IPR015507) - T[9-210] 32.638 |
| SUPERFAMILY |
SAM-dependent_MTases (IPR029063) - T[24-209] 2.84E-36 |
| Pfam |
rRNA_MeTrfase_FtsJ_dom (IPR002877) - T[25-209] 1.3E-68 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRM7_HUMAN | 66.562 % | 417 | 2.59E-147 |
| SPB1_HUMAN | 37.788 % | 151 | 8.61E-41 |
| MRM2_HUMAN | 34.483 % | 115 | 2.51E-30 |