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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L98.1.v1.A...'
  2. Transcript 'KH2012:KH.C5.140.v2....'
  3. Transcript 'KH2012:KH.C2.288.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.288.v2.A.nonSL5-1

Possible name(s)

FTSJ1; FTSJ3; MRM2

Location

KhC2 [1,838,208 / 1,840,842]

Sequences

Amino acid sequence

Length: 166

>KH.C2.288.v2.A.nonSL5-1
IHSSPASTCCKDVTLLYAQLRLFFKKVTCAKPRSSRNSSIEAFVVCENYSPPPSYIPNMS
NPLLDMNYDLYANQLEGPNRVIAPFLACGDLSGFDSDRTYKLQLDGAEEYKYHPPTQSPI
NPPYKHACHLKSESKLAKETIAVAEEVATVEKTVKNLTLENCENNT

Nucleotide sequence

Length: 1,179

>KH2012:KH.C2.288.v2.A.nonSL5-1
AATTTTGCTATGGGAAGAACGTCTAAAGACAAACGCGATGTGTATTACCGTTTAGCCAAA
GAGCAAGGTTGGAGAGCAAGAAGTGCGTTTAAGTTGCTTCATTTAGATGAAGAATTTAAT
CTTTTCCACAATGGAGTTAAGAAAGTCGTTGATCTGTGTGCTGCCCCTGGTAGTTGGAGT
CAAGTGTTATCAAGAAAACTTCGAGGTACAGAAGTGGAAAATAACAAAGATGTTAAAATA
GTAGCAGTTGATCTGCAAGCAATGGCTGATTTGCCAGGAGTGATACAACTGCAAGGAGAC
ATTACAAATGTATCGACAGCACAATCAATTATCTCACATTTTGAGGGAGAGTCAGCTGAC
CTAGTGGTCTGTGATGGAGCACCTGATGTTACTGGTCTTCATGATATTGATGAATACATT
CAAGCCCAGCTTCTACTTGCTGCAAAGATGTTACATTGCTGTATGCTCAACTTCGATTAT
TTTTTAAAAAAGTAACCTGTGCAAAACCCAGAAGCTCAAGGAACTCTAGCATTGAAGCTT
TTGTTGTATGTGAAAACTACAGCCCACCTCCCAGTTATATTCCAAACATGTCCAACCCAC
TCCTGGACATGAATTATGACTTGTATGCGAACCAATTAGAAGGTCCTAACCGAGTGATCG
CACCTTTCTTAGCATGTGGTGATCTTAGTGGATTTGATTCAGACAGAACTTACAAATTAC
AGCTTGATGGTGCTGAAGAGTACAAGTACCATCCACCAACACAATCCCCAATTAATCCTC
CATATAAGCATGCATGTCACTTGAAATCTGAATCAAAGTTGGCCAAAGAAACGATAGCGG
TTGCAGAAGAAGTGGCTACCGTGGAGAAAACTGTTAAAAACTTGACTTTGGAAAACTGTG
AAAATAACACATAGATACATCAACAATTAGTTACGATTTAATTGATATTATCTTATACAT
TCTTAATGATAATATTATTCCAAGTGGTTTTTAAGCCCCGAGATGTGATTTGAAATGAGA
AATCAAAAGTGAGTTTACGCAATCATCTAGTTTTCGTATCAAAATTTAAATTAATTTTGT
GCGCTTTGGTTAAGTTGTATAGATAACAGTTTTATATAAGCATCTTTATGGTTAATACTC
TCTCTGGAGTCTTGCACAATAAAGCAATCATTGTTTTCA

InterProScan

Pfam
rRNA_MeTrfase_FtsJ_dom (IPR002877) - T[10-49] 1.5E-8
PANTHER
RNA_methyltr_E_Trm7 (IPR028590) - T[11-146] 9.2E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM7_HUMAN 64.341 % 163 4.09E-50