Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.288.v2.A.nonSL7-1

Possible name(s)

FTSJ1; FTSJ3; MRM2

Gene model

KH2012:KH.C2.288

Location

KhC2 [1,838,208 / 1,840,903]

Sequences

Amino acid sequence

Length: 166

>KH.C2.288.v2.A.nonSL7-1
IHSSPASTCCKDVTLLYAQLRLFFKKVTCAKPRSSRNSSIEAFVVCENYSPPPSYIPNMS
NPLLDMNYDLYANQLEGPNRVIAPFLACGDLSGFDSDRTYKLQLDGAEEYKYHPPTQSPI
NPPYKHACHLKSESKLAKETIAVAEEVATVEKTVKNLTLENCENNT

Nucleotide sequence

Length: 1,240

>KH2012:KH.C2.288.v2.A.nonSL7-1
ATACACACGGCTCTATTTTCTGAATTAAGGTTTGCTGGATAGATACTTCTATTTCTGATT
TAATTTTGCTATGGGAAGAACGTCTAAAGACAAACGCGATGTGTATTACCGTTTAGCCAA
AGAGCAAGGTTGGAGAGCAAGAAGTGCGTTTAAGTTGCTTCATTTAGATGAAGAATTTAA
TCTTTTCCACAATGGAGTTAAGAAAGTCGTTGATCTGTGTGCTGCCCCTGGTAGTTGGAG
TCAAGTGTTATCAAGAAAACTTCGAGGTACAGAAGTGGAAAATAACAAAGATGTTAAAAT
AGTAGCAGTTGATCTGCAAGCAATGGCTGATTTGCCAGGAGTGATACAACTGCAAGGAGA
CATTACAAATGTATCGACAGCACAATCAATTATCTCACATTTTGAGGGAGAGTCAGCTGA
CCTAGTGGTCTGTGATGGAGCACCTGATGTTACTGGTCTTCATGATATTGATGAATACAT
TCAAGCCCAGCTTCTACTTGCTGCAAAGATGTTACATTGCTGTATGCTCAACTTCGATTA
TTTTTTAAAAAAGTAACCTGTGCAAAACCCAGAAGCTCAAGGAACTCTAGCATTGAAGCT
TTTGTTGTATGTGAAAACTACAGCCCACCTCCCAGTTATATTCCAAACATGTCCAACCCA
CTCCTGGACATGAATTATGACTTGTATGCGAACCAATTAGAAGGTCCTAACCGAGTGATC
GCACCTTTCTTAGCATGTGGTGATCTTAGTGGATTTGATTCAGACAGAACTTACAAATTA
CAGCTTGATGGTGCTGAAGAGTACAAGTACCATCCACCAACACAATCCCCAATTAATCCT
CCATATAAGCATGCATGTCACTTGAAATCTGAATCAAAGTTGGCCAAAGAAACGATAGCG
GTTGCAGAAGAAGTGGCTACCGTGGAGAAAACTGTTAAAAACTTGACTTTGGAAAACTGT
GAAAATAACACATAGATACATCAACAATTAGTTACGATTTAATTGATATTATCTTATACA
TTCTTAATGATAATATTATTCCAAGTGGTTTTTAAGCCCCGAGATGTGATTTGAAATGAG
AAATCAAAAGTGAGTTTACGCAATCATCTAGTTTTCGTATCAAAATTTAAATTAATTTTG
TGCGCTTTGGTTAAGTTGTATAGATAACAGTTTTATATAAGCATCTTTATGGTTAATACT
CTCTCTGGAGTCTTGCACAATAAAGCAATCATTGTTTTCA

InterProScan

Pfam	rRNA_MeTrfase_FtsJ_dom (IPR002877) - T[10-49] 1.5E-8
PANTHER	RNA_methyltr_E_Trm7 (IPR028590) - T[11-146] 9.2E-39

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TRM7_HUMAN	64.341 %	163	4.09E-50