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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'NCBI:KH.XM_018816837...'
  4. Transcript 'Phmamm.CG.MTP2014.S4...'
  5. Transcript 'KH2012:KH.C2.292.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.292.v1.A.SL1-1

Possible name(s)

CARF

Location

KhC2 [1,717,155 / 1,725,247]

Sequences

Amino acid sequence

Length: 638

>KH.C2.292.v1.A.SL1-1
SAVTAKCLTAIIRFKSSMEIHILDDTVEPVDYGFTQEISPNFGYCESLGEADEIIRNYQE
KTLTKFCVCKSGKNFGQKDWQKSSHFISFESERGNIRIPFDGIPFMVIGTKVLQCQHGKD
SHKKSKERYKQMKERGEYPPSKKQRTLTNPTKKKDCPATIHLREVVTFPEFQMLKDTARY
RRKISCDIRTLLKNDPSKIQMERRIYILLPFINEHRFHIIGQCNPNLKQNVDPQLVEKIY
ELVNVSGVDSIDEMVQLLKNFVLEIFVGKKMPPVSNKRFYPSKKDIREHMANAVAKLRLS
KFQGSSIEMDDKVMEWLHKQPENCLFYQPCIIQKVTDANDDELSSVSDFWQNFCFFYQTR
EQQRLMAMYGNEICILDASFKLNKCSLPLYFILVRTNVDYQVVATFIVQEETPDALVEVF
DLLKDKNNNWSPKYFMIDADDTEINAVKQAFPTCQMYVSDFHREQAWWRWLHTESNGVSM
NDVLPLIMQLRSVAESKTIQETEASLNRLTSHPVWVVNKKLQSWFQNSWLRYKERWIWAY
RSNAILIQINMRNGIDVQNQQFKHDVLMNKRHLSLVELTTLLIETLLPQIYSRLMKKLFV
STVYVAYLYLLCALVLRANSLRVSVMFGQVHGGHARIY

Nucleotide sequence

Length: 2,905

>KH2012:KH.C2.292.v1.A.SL1-1
TCTGCAGTTACTGCAAAATGTTTGACTGCTATTATTAGGTTTAAATCCAGTATGGAGATA
CACATCCTTGATGACACAGTTGAACCAGTTGACTACGGGTTTACTCAAGAAATTTCACCA
AACTTCGGATATTGCGAATCACTCGGAGAAGCAGATGAAATAATACGGAACTATCAAGAA
AAAACTCTTACCAAATTCTGTGTCTGTAAGTCAGGAAAAAACTTTGGCCAAAAAGATTGG
CAAAAATCAAGTCACTTTATAAGTTTTGAATCGGAAAGAGGAAATATTCGTATTCCTTTT
GATGGGATTCCATTTATGGTTATTGGGACCAAAGTACTGCAGTGTCAGCATGGGAAGGAC
AGCCACAAAAAATCTAAGGAACGATACAAACAGATGAAGGAAAGAGGAGAGTACCCACCA
AGTAAGAAGCAACGAACACTGACAAACCCTACAAAGAAGAAAGATTGTCCAGCTACCATA
CATCTCAGAGAAGTTGTTACTTTTCCAGAGTTTCAAATGTTAAAGGACACCGCAAGATAC
CGAAGAAAAATATCCTGCGACATTCGTACTTTGCTTAAGAATGACCCAAGTAAAATACAA
ATGGAACGAAGAATTTATATATTGCTACCTTTCATAAATGAACATAGGTTTCATATCATA
GGGCAGTGTAATCCCAACTTGAAGCAAAATGTTGATCCTCAGTTGGTGGAAAAAATCTAT
GAACTTGTTAATGTTAGTGGAGTGGACAGCATTGATGAAATGGTGCAACTTTTAAAGAAT
TTCGTCTTAGAAATTTTTGTTGGAAAAAAAATGCCACCGGTTTCAAATAAAAGGTTTTAC
CCATCAAAGAAAGATATAAGAGAGCATATGGCAAATGCCGTGGCAAAATTGAGACTCTCC
AAGTTCCAAGGCAGCTCCATTGAAATGGATGATAAAGTAATGGAATGGTTGCACAAACAA
CCTGAGAATTGTTTATTCTATCAACCATGTATCATTCAAAAAGTTACCGATGCAAATGAT
GACGAGTTGTCATCTGTAAGTGATTTCTGGCAGAACTTTTGTTTTTTCTATCAAACTCGT
GAACAGCAACGTCTAATGGCGATGTATGGAAATGAAATCTGTATACTTGATGCTTCATTT
AAGTTAAACAAATGTTCCCTCCCCCTTTATTTCATCCTGGTGCGAACAAACGTTGACTAC
CAGGTAGTTGCTACGTTTATCGTACAAGAAGAAACTCCCGATGCTCTTGTGGAAGTCTTT
GATCTGTTAAAAGATAAAAACAATAACTGGTCACCCAAGTATTTTATGATAGATGCTGAC
GATACGGAAATCAATGCAGTTAAGCAAGCTTTCCCAACATGCCAGATGTATGTGAGTGAC
TTCCATCGAGAACAAGCTTGGTGGAGATGGTTACATACGGAGAGTAATGGTGTTTCTATG
AATGATGTACTTCCGCTTATTATGCAACTAAGATCTGTTGCTGAATCTAAAACAATCCAA
GAAACTGAAGCTTCGTTAAATCGACTCACATCTCATCCTGTTTGGGTCGTGAACAAAAAA
CTTCAGTCCTGGTTTCAAAACTCATGGCTTCGATATAAGGAGAGATGGATTTGGGCATAT
CGTAGCAACGCGATACTAATCCAAATAAACATGAGAAATGGAATTGATGTTCAAAACCAG
CAGTTCAAACATGATGTGTTAATGAACAAAAGACATTTGTCTCTTGTAGAGTTGACTACA
TTGTTAATAGAAACTTTGTTACCACAAATCTACAGCAGATTGATGAAAAAACTTTTCGTG
TCAACAGTCTATGTGGCTTACTTGTATTTATTGTGTGCCTTGGTTCTGAGAGCGAATTCC
CTTCGTGTCAGTGTCATGTTTGGACAAGTACATGGTGGCCATGCCCGCATCTATTAGCAT
TGTTAGAACACAAACTTATTTCATGGTGCCAGTTATCAAGCGCTTACCGGTTGCTGCCGT
TTTTGAAAATTGACCACGGAGTCCTGGGTCGTGAGAATTCGAACAATGACACTTCTGATT
CAGTTTTGCTTTGTAAAGACCCAGATGATAGCCATGAAATGGTGAAATTAACTGATGAAG
AATCCACTGTCAACACTTCGATTATCTGTGAAGAAAAAACAGATGAAACCTTAAACAATT
TTAAAACGAATATGCCACAGAATTGGGAAGTTGTCATATTTGGGGAATAAAGAGTTATTG
CACAAGACCTTATAGTTAATTTTTGGTTCAACAGTTGTTGTAGGGACTTCATAACGCTAG
GACTAACTTGACATTCAGTATATTAGGTAAATAAACGAGAGGCATTAAGCTACGAACAAA
TGTATGGACAGCAAGAGTATGAAAGATAACACTGATCTTTCACAACAGAATGGCTTTTGT
AGAATAAAGCACACATGCGAAAGCAGTACCGAGTAAAGGTGGCTGTACAAAGTATCCGCA
ATTCGTCCGTTTTGTCCAGATTTCGCTTCCGCACGCGGAATTCAGAAATGGGTTTGCACG
AATTCGCATGCTGGATACTGTGTACAGCCACTTTAAGAATATTTTACACGTGAAAGTAGG
GTCTACATAGTTTGCTCGAAGAACAGTCAACCGCTCCACTATAGCTATATACAGTTATGA
GGTTGGGAAGGATTTATTCCGACTATTTAGTGTTGCTTCCGTTTACATTGTTTGTTCAAT
AACTGCAGGTCTTGCAACAATGCTAATCCCACAGTGGAAATTTATTATTGTGGCGACTTG
CATGACGTCGACTGATCACACCTTCGTGCATATTATGTGTGGTGGACTCTTTATCTCTTG
TGCATTAACCACATTGATTCTCCCTTTTATTTTACGTCAACCTCCACACGACTGTATTCC
GGTTACCTGCAACGTACTACAATAT

InterProScan

Pfam
CaRF (IPR029309) - T[80-293] 6.6E-63
Pfam
MULE_transposase_dom (IPR018289) - T[374-465] 9.7E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value