Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Cisavi.CG.ENS81.R132...'
  2. Transcript 'Phmamm.CG.MTP2014.S2...'
  3. Transcript 'Cisavi.CG.ENS81.R54....'
  4. Transcript 'KH2012:KH.L154.1.v3....'
  5. Transcript 'KH2012:KH.C2.292.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.292.v1.A.SL2-1

Possible name(s)

CARF

Location

KhC2 [1,717,122 / 1,725,247]

Sequences

Amino acid sequence

Length: 649

>KH.C2.292.v1.A.SL2-1
NILCQYVNVLKSAVTAKCLTAIIRFKSSMEIHILDDTVEPVDYGFTQEISPNFGYCESLG
EADEIIRNYQEKTLTKFCVCKSGKNFGQKDWQKSSHFISFESERGNIRIPFDGIPFMVIG
TKVLQCQHGKDSHKKSKERYKQMKERGEYPPSKKQRTLTNPTKKKDCPATIHLREVVTFP
EFQMLKDTARYRRKISCDIRTLLKNDPSKIQMERRIYILLPFINEHRFHIIGQCNPNLKQ
NVDPQLVEKIYELVNVSGVDSIDEMVQLLKNFVLEIFVGKKMPPVSNKRFYPSKKDIREH
MANAVAKLRLSKFQGSSIEMDDKVMEWLHKQPENCLFYQPCIIQKVTDANDDELSSVSDF
WQNFCFFYQTREQQRLMAMYGNEICILDASFKLNKCSLPLYFILVRTNVDYQVVATFIVQ
EETPDALVEVFDLLKDKNNNWSPKYFMIDADDTEINAVKQAFPTCQMYVSDFHREQAWWR
WLHTESNGVSMNDVLPLIMQLRSVAESKTIQETEASLNRLTSHPVWVVNKKLQSWFQNSW
LRYKERWIWAYRSNAILIQINMRNGIDVQNQQFKHDVLMNKRHLSLVELTTLLIETLLPQ
IYSRLMKKLFVSTVYVAYLYLLCALVLRANSLRVSVMFGQVHGGHARIY

Nucleotide sequence

Length: 2,938

>KH2012:KH.C2.292.v1.A.SL2-1
AATATTCTGTGCCAATATGTAAACGTATTAAAGTCTGCAGTTACTGCAAAATGTTTGACT
GCTATTATTAGGTTTAAATCCAGTATGGAGATACACATCCTTGATGACACAGTTGAACCA
GTTGACTACGGGTTTACTCAAGAAATTTCACCAAACTTCGGATATTGCGAATCACTCGGA
GAAGCAGATGAAATAATACGGAACTATCAAGAAAAAACTCTTACCAAATTCTGTGTCTGT
AAGTCAGGAAAAAACTTTGGCCAAAAAGATTGGCAAAAATCAAGTCACTTTATAAGTTTT
GAATCGGAAAGAGGAAATATTCGTATTCCTTTTGATGGGATTCCATTTATGGTTATTGGG
ACCAAAGTACTGCAGTGTCAGCATGGGAAGGACAGCCACAAAAAATCTAAGGAACGATAC
AAACAGATGAAGGAAAGAGGAGAGTACCCACCAAGTAAGAAGCAACGAACACTGACAAAC
CCTACAAAGAAGAAAGATTGTCCAGCTACCATACATCTCAGAGAAGTTGTTACTTTTCCA
GAGTTTCAAATGTTAAAGGACACCGCAAGATACCGAAGAAAAATATCCTGCGACATTCGT
ACTTTGCTTAAGAATGACCCAAGTAAAATACAAATGGAACGAAGAATTTATATATTGCTA
CCTTTCATAAATGAACATAGGTTTCATATCATAGGGCAGTGTAATCCCAACTTGAAGCAA
AATGTTGATCCTCAGTTGGTGGAAAAAATCTATGAACTTGTTAATGTTAGTGGAGTGGAC
AGCATTGATGAAATGGTGCAACTTTTAAAGAATTTCGTCTTAGAAATTTTTGTTGGAAAA
AAAATGCCACCGGTTTCAAATAAAAGGTTTTACCCATCAAAGAAAGATATAAGAGAGCAT
ATGGCAAATGCCGTGGCAAAATTGAGACTCTCCAAGTTCCAAGGCAGCTCCATTGAAATG
GATGATAAAGTAATGGAATGGTTGCACAAACAACCTGAGAATTGTTTATTCTATCAACCA
TGTATCATTCAAAAAGTTACCGATGCAAATGATGACGAGTTGTCATCTGTAAGTGATTTC
TGGCAGAACTTTTGTTTTTTCTATCAAACTCGTGAACAGCAACGTCTAATGGCGATGTAT
GGAAATGAAATCTGTATACTTGATGCTTCATTTAAGTTAAACAAATGTTCCCTCCCCCTT
TATTTCATCCTGGTGCGAACAAACGTTGACTACCAGGTAGTTGCTACGTTTATCGTACAA
GAAGAAACTCCCGATGCTCTTGTGGAAGTCTTTGATCTGTTAAAAGATAAAAACAATAAC
TGGTCACCCAAGTATTTTATGATAGATGCTGACGATACGGAAATCAATGCAGTTAAGCAA
GCTTTCCCAACATGCCAGATGTATGTGAGTGACTTCCATCGAGAACAAGCTTGGTGGAGA
TGGTTACATACGGAGAGTAATGGTGTTTCTATGAATGATGTACTTCCGCTTATTATGCAA
CTAAGATCTGTTGCTGAATCTAAAACAATCCAAGAAACTGAAGCTTCGTTAAATCGACTC
ACATCTCATCCTGTTTGGGTCGTGAACAAAAAACTTCAGTCCTGGTTTCAAAACTCATGG
CTTCGATATAAGGAGAGATGGATTTGGGCATATCGTAGCAACGCGATACTAATCCAAATA
AACATGAGAAATGGAATTGATGTTCAAAACCAGCAGTTCAAACATGATGTGTTAATGAAC
AAAAGACATTTGTCTCTTGTAGAGTTGACTACATTGTTAATAGAAACTTTGTTACCACAA
ATCTACAGCAGATTGATGAAAAAACTTTTCGTGTCAACAGTCTATGTGGCTTACTTGTAT
TTATTGTGTGCCTTGGTTCTGAGAGCGAATTCCCTTCGTGTCAGTGTCATGTTTGGACAA
GTACATGGTGGCCATGCCCGCATCTATTAGCATTGTTAGAACACAAACTTATTTCATGGT
GCCAGTTATCAAGCGCTTACCGGTTGCTGCCGTTTTTGAAAATTGACCACGGAGTCCTGG
GTCGTGAGAATTCGAACAATGACACTTCTGATTCAGTTTTGCTTTGTAAAGACCCAGATG
ATAGCCATGAAATGGTGAAATTAACTGATGAAGAATCCACTGTCAACACTTCGATTATCT
GTGAAGAAAAAACAGATGAAACCTTAAACAATTTTAAAACGAATATGCCACAGAATTGGG
AAGTTGTCATATTTGGGGAATAAAGAGTTATTGCACAAGACCTTATAGTTAATTTTTGGT
TCAACAGTTGTTGTAGGGACTTCATAACGCTAGGACTAACTTGACATTCAGTATATTAGG
TAAATAAACGAGAGGCATTAAGCTACGAACAAATGTATGGACAGCAAGAGTATGAAAGAT
AACACTGATCTTTCACAACAGAATGGCTTTTGTAGAATAAAGCACACATGCGAAAGCAGT
ACCGAGTAAAGGTGGCTGTACAAAGTATCCGCAATTCGTCCGTTTTGTCCAGATTTCGCT
TCCGCACGCGGAATTCAGAAATGGGTTTGCACGAATTCGCATGCTGGATACTGTGTACAG
CCACTTTAAGAATATTTTACACGTGAAAGTAGGGTCTACATAGTTTGCTCGAAGAACAGT
CAACCGCTCCACTATAGCTATATACAGTTATGAGGTTGGGAAGGATTTATTCCGACTATT
TAGTGTTGCTTCCGTTTACATTGTTTGTTCAATAACTGCAGGTCTTGCAACAATGCTAAT
CCCACAGTGGAAATTTATTATTGTGGCGACTTGCATGACGTCGACTGATCACACCTTCGT
GCATATTATGTGTGGTGGACTCTTTATCTCTTGTGCATTAACCACATTGATTCTCCCTTT
TATTTTACGTCAACCTCCACACGACTGTATTCCGGTTACCTGCAACGTACTACAATAT

InterProScan

Pfam
CaRF (IPR029309) - T[91-304] 6.9E-63
Pfam
MULE_transposase_dom (IPR018289) - T[385-476] 9.9E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value