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TRANSCRIPT CARD

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  1. Transcript 'NCBI:KH.XM_018817162...'
  2. Transcript 'Phmamm.CG.MTP2014.S4...'
  3. Transcript 'Phmamm.CG.MTP2014.S4...'
  4. Transcript 'KH2012:KH.C2.292.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.292.v1.A.SL3-1

Possible name(s)

CARF

Location

KhC2 [1,717,205 / 1,725,247]

Sequences

Amino acid sequence

Length: 621

>KH.C2.292.v1.A.SL3-1
MEIHILDDTVEPVDYGFTQEISPNFGYCESLGEADEIIRNYQEKTLTKFCVCKSGKNFGQ
KDWQKSSHFISFESERGNIRIPFDGIPFMVIGTKVLQCQHGKDSHKKSKERYKQMKERGE
YPPSKKQRTLTNPTKKKDCPATIHLREVVTFPEFQMLKDTARYRRKISCDIRTLLKNDPS
KIQMERRIYILLPFINEHRFHIIGQCNPNLKQNVDPQLVEKIYELVNVSGVDSIDEMVQL
LKNFVLEIFVGKKMPPVSNKRFYPSKKDIREHMANAVAKLRLSKFQGSSIEMDDKVMEWL
HKQPENCLFYQPCIIQKVTDANDDELSSVSDFWQNFCFFYQTREQQRLMAMYGNEICILD
ASFKLNKCSLPLYFILVRTNVDYQVVATFIVQEETPDALVEVFDLLKDKNNNWSPKYFMI
DADDTEINAVKQAFPTCQMYVSDFHREQAWWRWLHTESNGVSMNDVLPLIMQLRSVAESK
TIQETEASLNRLTSHPVWVVNKKLQSWFQNSWLRYKERWIWAYRSNAILIQINMRNGIDV
QNQQFKHDVLMNKRHLSLVELTTLLIETLLPQIYSRLMKKLFVSTVYVAYLYLLCALVLR
ANSLRVSVMFGQVHGGHARIY

Nucleotide sequence

Length: 2,855

>KH2012:KH.C2.292.v1.A.SL3-1
TATGGAGATACACATCCTTGATGACACAGTTGAACCAGTTGACTACGGGTTTACTCAAGA
AATTTCACCAAACTTCGGATATTGCGAATCACTCGGAGAAGCAGATGAAATAATACGGAA
CTATCAAGAAAAAACTCTTACCAAATTCTGTGTCTGTAAGTCAGGAAAAAACTTTGGCCA
AAAAGATTGGCAAAAATCAAGTCACTTTATAAGTTTTGAATCGGAAAGAGGAAATATTCG
TATTCCTTTTGATGGGATTCCATTTATGGTTATTGGGACCAAAGTACTGCAGTGTCAGCA
TGGGAAGGACAGCCACAAAAAATCTAAGGAACGATACAAACAGATGAAGGAAAGAGGAGA
GTACCCACCAAGTAAGAAGCAACGAACACTGACAAACCCTACAAAGAAGAAAGATTGTCC
AGCTACCATACATCTCAGAGAAGTTGTTACTTTTCCAGAGTTTCAAATGTTAAAGGACAC
CGCAAGATACCGAAGAAAAATATCCTGCGACATTCGTACTTTGCTTAAGAATGACCCAAG
TAAAATACAAATGGAACGAAGAATTTATATATTGCTACCTTTCATAAATGAACATAGGTT
TCATATCATAGGGCAGTGTAATCCCAACTTGAAGCAAAATGTTGATCCTCAGTTGGTGGA
AAAAATCTATGAACTTGTTAATGTTAGTGGAGTGGACAGCATTGATGAAATGGTGCAACT
TTTAAAGAATTTCGTCTTAGAAATTTTTGTTGGAAAAAAAATGCCACCGGTTTCAAATAA
AAGGTTTTACCCATCAAAGAAAGATATAAGAGAGCATATGGCAAATGCCGTGGCAAAATT
GAGACTCTCCAAGTTCCAAGGCAGCTCCATTGAAATGGATGATAAAGTAATGGAATGGTT
GCACAAACAACCTGAGAATTGTTTATTCTATCAACCATGTATCATTCAAAAAGTTACCGA
TGCAAATGATGACGAGTTGTCATCTGTAAGTGATTTCTGGCAGAACTTTTGTTTTTTCTA
TCAAACTCGTGAACAGCAACGTCTAATGGCGATGTATGGAAATGAAATCTGTATACTTGA
TGCTTCATTTAAGTTAAACAAATGTTCCCTCCCCCTTTATTTCATCCTGGTGCGAACAAA
CGTTGACTACCAGGTAGTTGCTACGTTTATCGTACAAGAAGAAACTCCCGATGCTCTTGT
GGAAGTCTTTGATCTGTTAAAAGATAAAAACAATAACTGGTCACCCAAGTATTTTATGAT
AGATGCTGACGATACGGAAATCAATGCAGTTAAGCAAGCTTTCCCAACATGCCAGATGTA
TGTGAGTGACTTCCATCGAGAACAAGCTTGGTGGAGATGGTTACATACGGAGAGTAATGG
TGTTTCTATGAATGATGTACTTCCGCTTATTATGCAACTAAGATCTGTTGCTGAATCTAA
AACAATCCAAGAAACTGAAGCTTCGTTAAATCGACTCACATCTCATCCTGTTTGGGTCGT
GAACAAAAAACTTCAGTCCTGGTTTCAAAACTCATGGCTTCGATATAAGGAGAGATGGAT
TTGGGCATATCGTAGCAACGCGATACTAATCCAAATAAACATGAGAAATGGAATTGATGT
TCAAAACCAGCAGTTCAAACATGATGTGTTAATGAACAAAAGACATTTGTCTCTTGTAGA
GTTGACTACATTGTTAATAGAAACTTTGTTACCACAAATCTACAGCAGATTGATGAAAAA
ACTTTTCGTGTCAACAGTCTATGTGGCTTACTTGTATTTATTGTGTGCCTTGGTTCTGAG
AGCGAATTCCCTTCGTGTCAGTGTCATGTTTGGACAAGTACATGGTGGCCATGCCCGCAT
CTATTAGCATTGTTAGAACACAAACTTATTTCATGGTGCCAGTTATCAAGCGCTTACCGG
TTGCTGCCGTTTTTGAAAATTGACCACGGAGTCCTGGGTCGTGAGAATTCGAACAATGAC
ACTTCTGATTCAGTTTTGCTTTGTAAAGACCCAGATGATAGCCATGAAATGGTGAAATTA
ACTGATGAAGAATCCACTGTCAACACTTCGATTATCTGTGAAGAAAAAACAGATGAAACC
TTAAACAATTTTAAAACGAATATGCCACAGAATTGGGAAGTTGTCATATTTGGGGAATAA
AGAGTTATTGCACAAGACCTTATAGTTAATTTTTGGTTCAACAGTTGTTGTAGGGACTTC
ATAACGCTAGGACTAACTTGACATTCAGTATATTAGGTAAATAAACGAGAGGCATTAAGC
TACGAACAAATGTATGGACAGCAAGAGTATGAAAGATAACACTGATCTTTCACAACAGAA
TGGCTTTTGTAGAATAAAGCACACATGCGAAAGCAGTACCGAGTAAAGGTGGCTGTACAA
AGTATCCGCAATTCGTCCGTTTTGTCCAGATTTCGCTTCCGCACGCGGAATTCAGAAATG
GGTTTGCACGAATTCGCATGCTGGATACTGTGTACAGCCACTTTAAGAATATTTTACACG
TGAAAGTAGGGTCTACATAGTTTGCTCGAAGAACAGTCAACCGCTCCACTATAGCTATAT
ACAGTTATGAGGTTGGGAAGGATTTATTCCGACTATTTAGTGTTGCTTCCGTTTACATTG
TTTGTTCAATAACTGCAGGTCTTGCAACAATGCTAATCCCACAGTGGAAATTTATTATTG
TGGCGACTTGCATGACGTCGACTGATCACACCTTCGTGCATATTATGTGTGGTGGACTCT
TTATCTCTTGTGCATTAACCACATTGATTCTCCCTTTTATTTTACGTCAACCTCCACACG
ACTGTATTCCGGTTACCTGCAACGTACTACAATAT

InterProScan

Pfam
CaRF (IPR029309) - T[63-276] 6.3E-63
Pfam
MULE_transposase_dom (IPR018289) - T[357-448] 9.3E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value