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  1. Clone 'cien231329'
  2. Clone 'cilv024h21'
  3. Transcript 'KH2012:KH.C2.516.v2....'
  4. Clone 'cign028i03'
  5. Transcript 'KH2012:KH.C2.292.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.292.v2.A.SL1-1

Possible name(s)

CARF

Location

KhC2 [1,717,155 / 1,725,247]

Sequences

Amino acid sequence

Length: 787

>KH.C2.292.v2.A.SL1-1
SAVTAKCLTAIIRFKSSMEIHILDDTVEPVDYGFTQEISPNFGYCESLGEADEIIRNYQE
KTLTKFCVCKSGKNFGQKDWQKSSHFISFESERGNIRIPFDGIPFMVIGTKVLQCQHGKD
SHKKSKERYKQMKERGEYPPSKKQRTLTNPTKKKDCPATIHLREVVTFPEFQMLKDTARY
RRKISCDIRTLLKNDPSKIQMERRIYILLPFINEHRFHIIGQCNPNLKQNVDPQLVEKIY
ELVNVSGVDSIDEMVQLLKNFVLEIFVGKKMPPVSNKRFYPSKKDIREHMANAVAKLRLS
KFQGSSIEMDDKVMEWLHKQPENCLFYQPCIIQKVTDANDDELSSVSDFWQNFCFFYQTR
EQQRLMAMYGNEICILDASFKLNKCSLPLYFILVRTNVDYQVVATFIVQEETPDALVEVF
DLLKDKNNNWSPKYFMIDADDTEINAVKQAFPTCQMYVSDFHREQAWWRWLHTESNGVSM
NDVLPLIMQLRSVAESKTIQETEASLNRLTSHPVWVVNKKLQSWFQNSWLRYKERWIWAY
RSNAILIQINMRNGIDVQNQQFKHDVLMNKRHLSLVELTTLLIETLLPQIYSRYVELNLI
SYAENTTCSNNISPYLQNRPQEFTQHCLSQLPVAHDFGKDLIKKIDEKTFRVNSLCGLLV
FIVCLGSESEFPSCQCHVWTSTWWPCPHLLALLEHKLISWCQLSSAYRLLPFLKIDHGVL
GRENSNNDTSDSVLLCKDPDDSHEMVKLTDEESTVNTSIICEEKTDETLNNFKTNMPQNW
EVVIFGE

Nucleotide sequence

Length: 3,059

>KH2012:KH.C2.292.v2.A.SL1-1
TCTGCAGTTACTGCAAAATGTTTGACTGCTATTATTAGGTTTAAATCCAGTATGGAGATA
CACATCCTTGATGACACAGTTGAACCAGTTGACTACGGGTTTACTCAAGAAATTTCACCA
AACTTCGGATATTGCGAATCACTCGGAGAAGCAGATGAAATAATACGGAACTATCAAGAA
AAAACTCTTACCAAATTCTGTGTCTGTAAGTCAGGAAAAAACTTTGGCCAAAAAGATTGG
CAAAAATCAAGTCACTTTATAAGTTTTGAATCGGAAAGAGGAAATATTCGTATTCCTTTT
GATGGGATTCCATTTATGGTTATTGGGACCAAAGTACTGCAGTGTCAGCATGGGAAGGAC
AGCCACAAAAAATCTAAGGAACGATACAAACAGATGAAGGAAAGAGGAGAGTACCCACCA
AGTAAGAAGCAACGAACACTGACAAACCCTACAAAGAAGAAAGATTGTCCAGCTACCATA
CATCTCAGAGAAGTTGTTACTTTTCCAGAGTTTCAAATGTTAAAGGACACCGCAAGATAC
CGAAGAAAAATATCCTGCGACATTCGTACTTTGCTTAAGAATGACCCAAGTAAAATACAA
ATGGAACGAAGAATTTATATATTGCTACCTTTCATAAATGAACATAGGTTTCATATCATA
GGGCAGTGTAATCCCAACTTGAAGCAAAATGTTGATCCTCAGTTGGTGGAAAAAATCTAT
GAACTTGTTAATGTTAGTGGAGTGGACAGCATTGATGAAATGGTGCAACTTTTAAAGAAT
TTCGTCTTAGAAATTTTTGTTGGAAAAAAAATGCCACCGGTTTCAAATAAAAGGTTTTAC
CCATCAAAGAAAGATATAAGAGAGCATATGGCAAATGCCGTGGCAAAATTGAGACTCTCC
AAGTTCCAAGGCAGCTCCATTGAAATGGATGATAAAGTAATGGAATGGTTGCACAAACAA
CCTGAGAATTGTTTATTCTATCAACCATGTATCATTCAAAAAGTTACCGATGCAAATGAT
GACGAGTTGTCATCTGTAAGTGATTTCTGGCAGAACTTTTGTTTTTTCTATCAAACTCGT
GAACAGCAACGTCTAATGGCGATGTATGGAAATGAAATCTGTATACTTGATGCTTCATTT
AAGTTAAACAAATGTTCCCTCCCCCTTTATTTCATCCTGGTGCGAACAAACGTTGACTAC
CAGGTAGTTGCTACGTTTATCGTACAAGAAGAAACTCCCGATGCTCTTGTGGAAGTCTTT
GATCTGTTAAAAGATAAAAACAATAACTGGTCACCCAAGTATTTTATGATAGATGCTGAC
GATACGGAAATCAATGCAGTTAAGCAAGCTTTCCCAACATGCCAGATGTATGTGAGTGAC
TTCCATCGAGAACAAGCTTGGTGGAGATGGTTACATACGGAGAGTAATGGTGTTTCTATG
AATGATGTACTTCCGCTTATTATGCAACTAAGATCTGTTGCTGAATCTAAAACAATCCAA
GAAACTGAAGCTTCGTTAAATCGACTCACATCTCATCCTGTTTGGGTCGTGAACAAAAAA
CTTCAGTCCTGGTTTCAAAACTCATGGCTTCGATATAAGGAGAGATGGATTTGGGCATAT
CGTAGCAACGCGATACTAATCCAAATAAACATGAGAAATGGAATTGATGTTCAAAACCAG
CAGTTCAAACATGATGTGTTAATGAACAAAAGACATTTGTCTCTTGTAGAGTTGACTACA
TTGTTAATAGAAACTTTGTTACCACAAATCTACAGCAGGTATGTTGAGTTGAACCTCATA
TCATATGCGGAAAACACAACCTGTTCAAACAATATTTCTCCTTATCTGCAAAACCGACCA
CAGGAATTCACCCAACATTGCTTGTCACAACTACCTGTGGCTCATGACTTTGGTAAAGAT
CTCATTAAAAAGATTGATGAAAAAACTTTTCGTGTCAACAGTCTATGTGGCTTACTTGTA
TTTATTGTGTGCCTTGGTTCTGAGAGCGAATTCCCTTCGTGTCAGTGTCATGTTTGGACA
AGTACATGGTGGCCATGCCCGCATCTATTAGCATTGTTAGAACACAAACTTATTTCATGG
TGCCAGTTATCAAGCGCTTACCGGTTGCTGCCGTTTTTGAAAATTGACCACGGAGTCCTG
GGTCGTGAGAATTCGAACAATGACACTTCTGATTCAGTTTTGCTTTGTAAAGACCCAGAT
GATAGCCATGAAATGGTGAAATTAACTGATGAAGAATCCACTGTCAACACTTCGATTATC
TGTGAAGAAAAAACAGATGAAACCTTAAACAATTTTAAAACGAATATGCCACAGAATTGG
GAAGTTGTCATATTTGGGGAATAAAGAGTTATTGCACAAGACCTTATAGTTAATTTTTGG
TTCAACAGTTGTTGTAGGGACTTCATAACGCTAGGACTAACTTGACATTCAGTATATTAG
GTAAATAAACGAGAGGCATTAAGCTACGAACAAATGTATGGACAGCAAGAGTATGAAAGA
TAACACTGATCTTTCACAACAGAATGGCTTTTGTAGAATAAAGCACACATGCGAAAGCAG
TACCGAGTAAAGGTGGCTGTACAAAGTATCCGCAATTCGTCCGTTTTGTCCAGATTTCGC
TTCCGCACGCGGAATTCAGAAATGGGTTTGCACGAATTCGCATGCTGGATACTGTGTACA
GCCACTTTAAGAATATTTTACACGTGAAAGTAGGGTCTACATAGTTTGCTCGAAGAACAG
TCAACCGCTCCACTATAGCTATATACAGTTATGAGGTTGGGAAGGATTTATTCCGACTAT
TTAGTGTTGCTTCCGTTTACATTGTTTGTTCAATAACTGCAGGTCTTGCAACAATGCTAA
TCCCACAGTGGAAATTTATTATTGTGGCGACTTGCATGACGTCGACTGATCACACCTTCG
TGCATATTATGTGTGGTGGACTCTTTATCTCTTGTGCATTAACCACATTGATTCTCCCTT
TTATTTTACGTCAACCTCCACACGACTGTATTCCGGTTACCTGCAACGTACTACAATAT

InterProScan

Pfam
CaRF (IPR029309) - T[80-293] 1.0E-62
Pfam
MULE_transposase_dom (IPR018289) - T[374-465] 1.3E-13
ProSiteProfiles
Znf_SWIM (IPR007527) - T[661-697] 8.815

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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