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  1. Transcript 'KH2012:KH.L149.26.v1...'
  2. Clone 'cicl028k16'
  3. Transcript 'KH2012:KH.C2.292.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.292.v2.A.SL2-1

Possible name(s)

CARF

Location

KhC2 [1,717,122 / 1,725,247]

Sequences

Amino acid sequence

Length: 798

>KH.C2.292.v2.A.SL2-1
NILCQYVNVLKSAVTAKCLTAIIRFKSSMEIHILDDTVEPVDYGFTQEISPNFGYCESLG
EADEIIRNYQEKTLTKFCVCKSGKNFGQKDWQKSSHFISFESERGNIRIPFDGIPFMVIG
TKVLQCQHGKDSHKKSKERYKQMKERGEYPPSKKQRTLTNPTKKKDCPATIHLREVVTFP
EFQMLKDTARYRRKISCDIRTLLKNDPSKIQMERRIYILLPFINEHRFHIIGQCNPNLKQ
NVDPQLVEKIYELVNVSGVDSIDEMVQLLKNFVLEIFVGKKMPPVSNKRFYPSKKDIREH
MANAVAKLRLSKFQGSSIEMDDKVMEWLHKQPENCLFYQPCIIQKVTDANDDELSSVSDF
WQNFCFFYQTREQQRLMAMYGNEICILDASFKLNKCSLPLYFILVRTNVDYQVVATFIVQ
EETPDALVEVFDLLKDKNNNWSPKYFMIDADDTEINAVKQAFPTCQMYVSDFHREQAWWR
WLHTESNGVSMNDVLPLIMQLRSVAESKTIQETEASLNRLTSHPVWVVNKKLQSWFQNSW
LRYKERWIWAYRSNAILIQINMRNGIDVQNQQFKHDVLMNKRHLSLVELTTLLIETLLPQ
IYSRYVELNLISYAENTTCSNNISPYLQNRPQEFTQHCLSQLPVAHDFGKDLIKKIDEKT
FRVNSLCGLLVFIVCLGSESEFPSCQCHVWTSTWWPCPHLLALLEHKLISWCQLSSAYRL
LPFLKIDHGVLGRENSNNDTSDSVLLCKDPDDSHEMVKLTDEESTVNTSIICEEKTDETL
NNFKTNMPQNWEVVIFGE

Nucleotide sequence

Length: 3,092

>KH2012:KH.C2.292.v2.A.SL2-1
AATATTCTGTGCCAATATGTAAACGTATTAAAGTCTGCAGTTACTGCAAAATGTTTGACT
GCTATTATTAGGTTTAAATCCAGTATGGAGATACACATCCTTGATGACACAGTTGAACCA
GTTGACTACGGGTTTACTCAAGAAATTTCACCAAACTTCGGATATTGCGAATCACTCGGA
GAAGCAGATGAAATAATACGGAACTATCAAGAAAAAACTCTTACCAAATTCTGTGTCTGT
AAGTCAGGAAAAAACTTTGGCCAAAAAGATTGGCAAAAATCAAGTCACTTTATAAGTTTT
GAATCGGAAAGAGGAAATATTCGTATTCCTTTTGATGGGATTCCATTTATGGTTATTGGG
ACCAAAGTACTGCAGTGTCAGCATGGGAAGGACAGCCACAAAAAATCTAAGGAACGATAC
AAACAGATGAAGGAAAGAGGAGAGTACCCACCAAGTAAGAAGCAACGAACACTGACAAAC
CCTACAAAGAAGAAAGATTGTCCAGCTACCATACATCTCAGAGAAGTTGTTACTTTTCCA
GAGTTTCAAATGTTAAAGGACACCGCAAGATACCGAAGAAAAATATCCTGCGACATTCGT
ACTTTGCTTAAGAATGACCCAAGTAAAATACAAATGGAACGAAGAATTTATATATTGCTA
CCTTTCATAAATGAACATAGGTTTCATATCATAGGGCAGTGTAATCCCAACTTGAAGCAA
AATGTTGATCCTCAGTTGGTGGAAAAAATCTATGAACTTGTTAATGTTAGTGGAGTGGAC
AGCATTGATGAAATGGTGCAACTTTTAAAGAATTTCGTCTTAGAAATTTTTGTTGGAAAA
AAAATGCCACCGGTTTCAAATAAAAGGTTTTACCCATCAAAGAAAGATATAAGAGAGCAT
ATGGCAAATGCCGTGGCAAAATTGAGACTCTCCAAGTTCCAAGGCAGCTCCATTGAAATG
GATGATAAAGTAATGGAATGGTTGCACAAACAACCTGAGAATTGTTTATTCTATCAACCA
TGTATCATTCAAAAAGTTACCGATGCAAATGATGACGAGTTGTCATCTGTAAGTGATTTC
TGGCAGAACTTTTGTTTTTTCTATCAAACTCGTGAACAGCAACGTCTAATGGCGATGTAT
GGAAATGAAATCTGTATACTTGATGCTTCATTTAAGTTAAACAAATGTTCCCTCCCCCTT
TATTTCATCCTGGTGCGAACAAACGTTGACTACCAGGTAGTTGCTACGTTTATCGTACAA
GAAGAAACTCCCGATGCTCTTGTGGAAGTCTTTGATCTGTTAAAAGATAAAAACAATAAC
TGGTCACCCAAGTATTTTATGATAGATGCTGACGATACGGAAATCAATGCAGTTAAGCAA
GCTTTCCCAACATGCCAGATGTATGTGAGTGACTTCCATCGAGAACAAGCTTGGTGGAGA
TGGTTACATACGGAGAGTAATGGTGTTTCTATGAATGATGTACTTCCGCTTATTATGCAA
CTAAGATCTGTTGCTGAATCTAAAACAATCCAAGAAACTGAAGCTTCGTTAAATCGACTC
ACATCTCATCCTGTTTGGGTCGTGAACAAAAAACTTCAGTCCTGGTTTCAAAACTCATGG
CTTCGATATAAGGAGAGATGGATTTGGGCATATCGTAGCAACGCGATACTAATCCAAATA
AACATGAGAAATGGAATTGATGTTCAAAACCAGCAGTTCAAACATGATGTGTTAATGAAC
AAAAGACATTTGTCTCTTGTAGAGTTGACTACATTGTTAATAGAAACTTTGTTACCACAA
ATCTACAGCAGGTATGTTGAGTTGAACCTCATATCATATGCGGAAAACACAACCTGTTCA
AACAATATTTCTCCTTATCTGCAAAACCGACCACAGGAATTCACCCAACATTGCTTGTCA
CAACTACCTGTGGCTCATGACTTTGGTAAAGATCTCATTAAAAAGATTGATGAAAAAACT
TTTCGTGTCAACAGTCTATGTGGCTTACTTGTATTTATTGTGTGCCTTGGTTCTGAGAGC
GAATTCCCTTCGTGTCAGTGTCATGTTTGGACAAGTACATGGTGGCCATGCCCGCATCTA
TTAGCATTGTTAGAACACAAACTTATTTCATGGTGCCAGTTATCAAGCGCTTACCGGTTG
CTGCCGTTTTTGAAAATTGACCACGGAGTCCTGGGTCGTGAGAATTCGAACAATGACACT
TCTGATTCAGTTTTGCTTTGTAAAGACCCAGATGATAGCCATGAAATGGTGAAATTAACT
GATGAAGAATCCACTGTCAACACTTCGATTATCTGTGAAGAAAAAACAGATGAAACCTTA
AACAATTTTAAAACGAATATGCCACAGAATTGGGAAGTTGTCATATTTGGGGAATAAAGA
GTTATTGCACAAGACCTTATAGTTAATTTTTGGTTCAACAGTTGTTGTAGGGACTTCATA
ACGCTAGGACTAACTTGACATTCAGTATATTAGGTAAATAAACGAGAGGCATTAAGCTAC
GAACAAATGTATGGACAGCAAGAGTATGAAAGATAACACTGATCTTTCACAACAGAATGG
CTTTTGTAGAATAAAGCACACATGCGAAAGCAGTACCGAGTAAAGGTGGCTGTACAAAGT
ATCCGCAATTCGTCCGTTTTGTCCAGATTTCGCTTCCGCACGCGGAATTCAGAAATGGGT
TTGCACGAATTCGCATGCTGGATACTGTGTACAGCCACTTTAAGAATATTTTACACGTGA
AAGTAGGGTCTACATAGTTTGCTCGAAGAACAGTCAACCGCTCCACTATAGCTATATACA
GTTATGAGGTTGGGAAGGATTTATTCCGACTATTTAGTGTTGCTTCCGTTTACATTGTTT
GTTCAATAACTGCAGGTCTTGCAACAATGCTAATCCCACAGTGGAAATTTATTATTGTGG
CGACTTGCATGACGTCGACTGATCACACCTTCGTGCATATTATGTGTGGTGGACTCTTTA
TCTCTTGTGCATTAACCACATTGATTCTCCCTTTTATTTTACGTCAACCTCCACACGACT
GTATTCCGGTTACCTGCAACGTACTACAATAT

InterProScan

Pfam
CaRF (IPR029309) - T[91-304] 1.0E-62
Pfam
MULE_transposase_dom (IPR018289) - T[385-476] 1.3E-13
ProSiteProfiles
Znf_SWIM (IPR007527) - T[672-708] 8.815

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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