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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Mooccu.CG.ELv1_2.S28...' > 
  4. Transcript 'Cisavi.CG.ENS81.R0.1...' > 
  5. Transcript 'KH2012:KH.C2.292.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.292.v2.A.SL3-1

Possible name(s)

CARF

Gene model

KH2012:KH.C2.292

Location

KhC2 [1,717,205 / 1,725,247]

Sequences

Amino acid sequence

Length: 770

>KH.C2.292.v2.A.SL3-1
MEIHILDDTVEPVDYGFTQEISPNFGYCESLGEADEIIRNYQEKTLTKFCVCKSGKNFGQ
KDWQKSSHFISFESERGNIRIPFDGIPFMVIGTKVLQCQHGKDSHKKSKERYKQMKERGE
YPPSKKQRTLTNPTKKKDCPATIHLREVVTFPEFQMLKDTARYRRKISCDIRTLLKNDPS
KIQMERRIYILLPFINEHRFHIIGQCNPNLKQNVDPQLVEKIYELVNVSGVDSIDEMVQL
LKNFVLEIFVGKKMPPVSNKRFYPSKKDIREHMANAVAKLRLSKFQGSSIEMDDKVMEWL
HKQPENCLFYQPCIIQKVTDANDDELSSVSDFWQNFCFFYQTREQQRLMAMYGNEICILD
ASFKLNKCSLPLYFILVRTNVDYQVVATFIVQEETPDALVEVFDLLKDKNNNWSPKYFMI
DADDTEINAVKQAFPTCQMYVSDFHREQAWWRWLHTESNGVSMNDVLPLIMQLRSVAESK
TIQETEASLNRLTSHPVWVVNKKLQSWFQNSWLRYKERWIWAYRSNAILIQINMRNGIDV
QNQQFKHDVLMNKRHLSLVELTTLLIETLLPQIYSRYVELNLISYAENTTCSNNISPYLQ
NRPQEFTQHCLSQLPVAHDFGKDLIKKIDEKTFRVNSLCGLLVFIVCLGSESEFPSCQCH
VWTSTWWPCPHLLALLEHKLISWCQLSSAYRLLPFLKIDHGVLGRENSNNDTSDSVLLCK
DPDDSHEMVKLTDEESTVNTSIICEEKTDETLNNFKTNMPQNWEVVIFGE

Nucleotide sequence

Length: 3,009

>KH2012:KH.C2.292.v2.A.SL3-1
TATGGAGATACACATCCTTGATGACACAGTTGAACCAGTTGACTACGGGTTTACTCAAGA
AATTTCACCAAACTTCGGATATTGCGAATCACTCGGAGAAGCAGATGAAATAATACGGAA
CTATCAAGAAAAAACTCTTACCAAATTCTGTGTCTGTAAGTCAGGAAAAAACTTTGGCCA
AAAAGATTGGCAAAAATCAAGTCACTTTATAAGTTTTGAATCGGAAAGAGGAAATATTCG
TATTCCTTTTGATGGGATTCCATTTATGGTTATTGGGACCAAAGTACTGCAGTGTCAGCA
TGGGAAGGACAGCCACAAAAAATCTAAGGAACGATACAAACAGATGAAGGAAAGAGGAGA
GTACCCACCAAGTAAGAAGCAACGAACACTGACAAACCCTACAAAGAAGAAAGATTGTCC
AGCTACCATACATCTCAGAGAAGTTGTTACTTTTCCAGAGTTTCAAATGTTAAAGGACAC
CGCAAGATACCGAAGAAAAATATCCTGCGACATTCGTACTTTGCTTAAGAATGACCCAAG
TAAAATACAAATGGAACGAAGAATTTATATATTGCTACCTTTCATAAATGAACATAGGTT
TCATATCATAGGGCAGTGTAATCCCAACTTGAAGCAAAATGTTGATCCTCAGTTGGTGGA
AAAAATCTATGAACTTGTTAATGTTAGTGGAGTGGACAGCATTGATGAAATGGTGCAACT
TTTAAAGAATTTCGTCTTAGAAATTTTTGTTGGAAAAAAAATGCCACCGGTTTCAAATAA
AAGGTTTTACCCATCAAAGAAAGATATAAGAGAGCATATGGCAAATGCCGTGGCAAAATT
GAGACTCTCCAAGTTCCAAGGCAGCTCCATTGAAATGGATGATAAAGTAATGGAATGGTT
GCACAAACAACCTGAGAATTGTTTATTCTATCAACCATGTATCATTCAAAAAGTTACCGA
TGCAAATGATGACGAGTTGTCATCTGTAAGTGATTTCTGGCAGAACTTTTGTTTTTTCTA
TCAAACTCGTGAACAGCAACGTCTAATGGCGATGTATGGAAATGAAATCTGTATACTTGA
TGCTTCATTTAAGTTAAACAAATGTTCCCTCCCCCTTTATTTCATCCTGGTGCGAACAAA
CGTTGACTACCAGGTAGTTGCTACGTTTATCGTACAAGAAGAAACTCCCGATGCTCTTGT
GGAAGTCTTTGATCTGTTAAAAGATAAAAACAATAACTGGTCACCCAAGTATTTTATGAT
AGATGCTGACGATACGGAAATCAATGCAGTTAAGCAAGCTTTCCCAACATGCCAGATGTA
TGTGAGTGACTTCCATCGAGAACAAGCTTGGTGGAGATGGTTACATACGGAGAGTAATGG
TGTTTCTATGAATGATGTACTTCCGCTTATTATGCAACTAAGATCTGTTGCTGAATCTAA
AACAATCCAAGAAACTGAAGCTTCGTTAAATCGACTCACATCTCATCCTGTTTGGGTCGT
GAACAAAAAACTTCAGTCCTGGTTTCAAAACTCATGGCTTCGATATAAGGAGAGATGGAT
TTGGGCATATCGTAGCAACGCGATACTAATCCAAATAAACATGAGAAATGGAATTGATGT
TCAAAACCAGCAGTTCAAACATGATGTGTTAATGAACAAAAGACATTTGTCTCTTGTAGA
GTTGACTACATTGTTAATAGAAACTTTGTTACCACAAATCTACAGCAGGTATGTTGAGTT
GAACCTCATATCATATGCGGAAAACACAACCTGTTCAAACAATATTTCTCCTTATCTGCA
AAACCGACCACAGGAATTCACCCAACATTGCTTGTCACAACTACCTGTGGCTCATGACTT
TGGTAAAGATCTCATTAAAAAGATTGATGAAAAAACTTTTCGTGTCAACAGTCTATGTGG
CTTACTTGTATTTATTGTGTGCCTTGGTTCTGAGAGCGAATTCCCTTCGTGTCAGTGTCA
TGTTTGGACAAGTACATGGTGGCCATGCCCGCATCTATTAGCATTGTTAGAACACAAACT
TATTTCATGGTGCCAGTTATCAAGCGCTTACCGGTTGCTGCCGTTTTTGAAAATTGACCA
CGGAGTCCTGGGTCGTGAGAATTCGAACAATGACACTTCTGATTCAGTTTTGCTTTGTAA
AGACCCAGATGATAGCCATGAAATGGTGAAATTAACTGATGAAGAATCCACTGTCAACAC
TTCGATTATCTGTGAAGAAAAAACAGATGAAACCTTAAACAATTTTAAAACGAATATGCC
ACAGAATTGGGAAGTTGTCATATTTGGGGAATAAAGAGTTATTGCACAAGACCTTATAGT
TAATTTTTGGTTCAACAGTTGTTGTAGGGACTTCATAACGCTAGGACTAACTTGACATTC
AGTATATTAGGTAAATAAACGAGAGGCATTAAGCTACGAACAAATGTATGGACAGCAAGA
GTATGAAAGATAACACTGATCTTTCACAACAGAATGGCTTTTGTAGAATAAAGCACACAT
GCGAAAGCAGTACCGAGTAAAGGTGGCTGTACAAAGTATCCGCAATTCGTCCGTTTTGTC
CAGATTTCGCTTCCGCACGCGGAATTCAGAAATGGGTTTGCACGAATTCGCATGCTGGAT
ACTGTGTACAGCCACTTTAAGAATATTTTACACGTGAAAGTAGGGTCTACATAGTTTGCT
CGAAGAACAGTCAACCGCTCCACTATAGCTATATACAGTTATGAGGTTGGGAAGGATTTA
TTCCGACTATTTAGTGTTGCTTCCGTTTACATTGTTTGTTCAATAACTGCAGGTCTTGCA
ACAATGCTAATCCCACAGTGGAAATTTATTATTGTGGCGACTTGCATGACGTCGACTGAT
CACACCTTCGTGCATATTATGTGTGGTGGACTCTTTATCTCTTGTGCATTAACCACATTG
ATTCTCCCTTTTATTTTACGTCAACCTCCACACGACTGTATTCCGGTTACCTGCAACGTA
CTACAATAT

InterProScan

Pfam
CaRF (IPR029309) - T[63-276] 9.6E-63
Pfam
MULE_transposase_dom (IPR018289) - T[357-448] 1.3E-13
ProSiteProfiles
Znf_SWIM (IPR007527) - T[644-680] 8.815

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value