Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.338.v2.A.nonSL5-1

Possible name(s)

ECH1; ECHDC2; ECHS1

Gene model

KH2012:KH.C2.338

Location

KhC2 [5,005,806 / 5,011,647]

Sequences

Amino acid sequence

Length: 309

>KH.C2.338.v2.A.nonSL5-1
LYSVALTIIMYRQCLNKLHQTVKLQPIGNALCVCNRKLTLDPQSEPAVDPITIDKRDKVT
LIGLNRPGSRNAVNRDMARQLTVAFLAFEQDNSSNVAVLHGKGDHFCAGYDLKELAHSES
GIDEETMNHLHNVHGAMGPTRLHIKKPVIAAVNGYGVAGGLELALLCDLRVFEESTIVGV
FNRRFGVPLVDGGTVRLPALVGLSNALDLILTGRAIDSEEAIRIGLANRVVKDGEALSFA
VELAKEISHHPQMSLRADRDSAYNAMFNSTSKKESLDYEMNHALDVVAHESIAGAKRFKD
GEGRQGMAI

Nucleotide sequence

Length: 1,439

>KH2012:KH.C2.338.v2.A.nonSL5-1
ATTCACTTTCGCAAATGATTTAGGTTGAAGCTGATCTAGTATTCTGTTGCAGTAGTTGTA
CAGTGTTGCATTAACAATCATAATGTATCGTCAGTGCTTAAACAAATTGCATCAAACTGT
TAAGTTGCAACCCATTGGAAACGCATTGTGTGTGTGCAATCGAAAATTGACGCTTGACCC
TCAGTCAGAACCAGCTGTGGATCCAATAACAATTGATAAACGTGACAAAGTTACCTTAAT
TGGTTTGAATCGACCTGGCTCACGGAATGCAGTCAACAGAGACATGGCACGTCAGCTCAC
AGTTGCTTTCCTTGCATTCGAACAAGATAATTCAAGTAACGTTGCAGTTTTACATGGAAA
AGGTGATCATTTTTGTGCCGGTTATGACTTAAAAGAACTTGCCCACTCTGAGTCAGGTAT
CGATGAAGAAACGATGAATCATTTGCATAACGTGCACGGAGCAATGGGCCCTACAAGACT
GCACATCAAAAAGCCAGTGATTGCAGCAGTTAATGGTTATGGTGTTGCTGGAGGGTTAGA
GCTTGCACTTCTCTGCGACCTCCGGGTCTTCGAGGAATCCACCATCGTCGGTGTCTTCAA
TCGGAGATTCGGAGTTCCTCTGGTTGATGGGGGCACGGTTCGTCTCCCTGCTTTGGTTGG
TCTCTCAAATGCATTAGACCTCATTTTGACAGGGAGGGCTATTGATTCTGAGGAAGCAAT
CAGGATTGGACTTGCAAATAGAGTGGTAAAGGATGGCGAAGCGCTGTCGTTCGCTGTCGA
GCTCGCGAAAGAGATATCTCACCATCCACAGATGAGTTTACGTGCGGACAGAGATTCTGC
TTATAACGCTATGTTCAACTCTACTTCGAAAAAGGAATCGCTTGATTACGAGATGAACCA
CGCACTAGATGTGGTTGCTCATGAGTCCATTGCTGGAGCAAAGCGATTTAAGGACGGAGA
AGGCAGACAAGGGATGGCTATTTAAAACAAGCTGTTCTGATCTCCGACCCCCGCCGCCAC
TTAACGATTATTACCCTATTTTTTGTAGAATGTTATTTTTCTAATCCAGCCAGGGTGATT
TTCATGCACACCATGAGTTTCGGTTGCTTCTGCTGTTGCGTTTTGTTCGTAATTTGTGTT
AACCGCTGTGACGTTTTGTTGTTCCCCTTCGTTCCAAGTGTTAGCTTTTCTTTTCGTGTT
CTAAAAGAACCCGGTCACATTTTCATACTGTGTATATACGAATGCACTGCTGCTCTCCCC
TAAGGAGCAGCGTACAACAGTTTTATCATCTTACCCGCATTTCACCTGCCAATGCCTAAT
TGCTGCAAACGCACTTGTATATTTGACTTTCGTTGTCGCTGCATTCCTGGGCCATAGATT
TCAAGATGTATTGTCGTCAGTAAAGATATATCGTGACAATTAAATTGTACCGGGACAAA

InterProScan

SUPERFAMILY	ClpP/crotonase-like_dom_sf (IPR029045) - T[48-290] 1.87E-62
Pfam	Enoyl-CoA_hydra/iso (IPR001753) - T[56-297] 5.5E-40
ProSitePatterns	Enoyl-CoA_hyd/isom_CS (IPR018376) - T[149-169] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ECHM_HUMAN	31.102 %	101	4.68E-25
ECHD2_HUMAN	34.951 %	100	1.36E-24
ECH1_HUMAN	30.837 %	79.7	4.97E-17