Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.338.v4.A.SL2-2

Possible name(s)

ECH1; ECHDC2; ECHS1

Gene model

KH2012:KH.C2.338

Location

KhC2 [5,007,277 / 5,011,595]

Sequences

Amino acid sequence

Length: 323

>KH.C2.338.v4.A.SL2-2
LYSVALTIIMYRQCLNKLHQTVKLQPIGNALCVCNRKLTLDPQSEPAVDPITIDKRDKVT
LIGLNRPGSRNAVNRDMARQLTVAFLAFEQDNSSNVAVLHGKGDHFCAGYDLKELAHSES
GIDEETMNHLHNVHGAMGSKFVYSNQQRFTEGPTRLHIKKPVIAAVNGYGVAGGLELALL
CDLRVFEESTIVGVFNRRFGVPLVDGGTVRLPALVGLSNALDLILTGRAIDSEEAIRIGL
ANRVVKDGEALSFAVELAKEISHHPQMSLRADRDSAYNAMFNSTSKKESLDYEMNHALDV
VAHESIAGAKRFKDGEGRQGVAI

Nucleotide sequence

Length: 1,474

>KH2012:KH.C2.338.v4.A.SL2-2
TAGTTGTACAGTGTTGCATTAACAATCATAATGTATCGTCAGTGCTTAAACAAATTGCAT
CAAACTGTTAAGTTGCAACCCATTGGAAACGCATTGTGTGTGTGCAATCGAAAATTGACG
CTTGACCCTCAGTCAGAACCAGCTGTGGATCCAATAACAATTGATAAACGTGACAAAGTT
ACCTTAATTGGTTTGAATCGACCTGGCTCACGGAATGCAGTCAACAGAGACATGGCACGT
CAGCTCACAGTTGCTTTCCTTGCATTCGAACAAGATAATTCAAGTAACGTTGCAGTTTTA
CATGGAAAAGGTGATCATTTTTGTGCCGGTTATGACTTAAAAGAACTTGCCCACTCTGAG
TCAGGTATCGATGAAGAAACGATGAATCATTTGCATAACGTGCACGGAGCAATGGGCTCT
AAGTTTGTGTATAGTAACCAGCAACGTTTTACTGAGGGCCCTACAAGACTGCACATCAAA
AAGCCAGTGATTGCAGCAGTTAATGGTTATGGTGTTGCTGGAGGGTTAGAGCTTGCACTT
CTCTGCGACCTCCGGGTCTTCGAGGAATCCACCATCGTCGGTGTCTTCAATCGGAGATTC
GGAGTTCCTCTGGTTGATGGGGGCACGGTTCGTCTCCCTGCTTTGGTTGGTCTCTCAAAT
GCATTAGACCTCATTTTGACAGGGAGGGCTATTGATTCTGAGGAAGCAATCAGGATTGGA
CTTGCAAATAGAGTGGTAAAGGATGGCGAAGCGCTGTCGTTCGCTGTCGAGCTCGCGAAA
GAGATATCTCACCATCCACAGATGAGTTTACGTGCGGACAGAGATTCTGCTTATAACGCT
ATGTTCAACTCTACTTCGAAAAAGGAATCGCTTGATTACGAGATGAACCACGCACTAGAT
GTGGTTGCTCATGAGTCCATTGCTGGAGCAAAGCGATTTAAGGACGGAGAAGGCAGACAA
GGGGTGGCTATTTAAAACAAGCTGTTCTGATCTCCGACCCCCGCCGCCACTTAACGATTA
TTACCCTTTTTTTTGTAGAATGTTATTTTTCTAATCCAGCCAGGGTGATTTTCATGCACA
CCATGAGTTTCGGTTGCTTCTGCTGTCGCGTTTTGTTCGTAATTTGTGTTAACCGCTGTG
ACGTTTTGTTGTTCCCCTTCGTTCCAAGTGTTAGCTTTTCTTTTCGTGTTCTAAAAGAAC
CCGGTCACATTTTCATACTGTGTATATACGAATGCACTGCTGCTCTCCCCTAAGGAGCGG
CGTACGACAGTTTTATCATCTTACCCGCATTTCACCTGCCAATGCCTAATTGCTGCAAAC
GCACTTGTATATTTGACTTTCGTTGTCGCTGCATTCCTGGGCCATAGATTTCAAGATGTA
TTGTCGTCAGTAAAGATATATCGTGACAATTAAATTGTACCGGGACAAACAAGCAATTCT
GTTGGAAAAAATACGTTCATTACATCAAGATAAT

InterProScan

SUPERFAMILY	ClpP/crotonase-like_dom_sf (IPR029045) - T[48-304] 4.38E-60
Pfam	Enoyl-CoA_hydra/iso (IPR001753) - T[56-311] 6.2E-37
ProSitePatterns	Enoyl-CoA_hyd/isom_CS (IPR018376) - T[163-183] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ECHD2_HUMAN	32.727 %	95.1	1.55E-22