Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S2...'
  2. Transcript 'Haaura.CG.MTP2014.S3...'
  3. Transcript 'KH2012:KH.C2.354.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.354.v1.A.ND1-1

Possible name(s)

CARF

Location

KhC2 [2,463,197 / 2,465,533]

Sequences

Amino acid sequence

Length: 535

>KH.C2.354.v1.A.ND1-1
PPIRLNTRYQNKTMACNIEKEEKSVYRVLSMYLNHAEKSGDYVKGSVDGKERLELFLSEY
NQSARTKFIIRSSCKKNKEFNLGDANTATESCTRYGRADRIYWEFNNRNLIVPFCGMPFV
TKSSQVKHCQFGAQYYKLKEEKQSKLTQSCHVADAHMTSHNDQAVQISSQKRRRLKPSKK
RNCPACMYIREVVLFPDFALTTTSCTVSKHVLRKNKSTIIHDLKQAMGERKLNTIHRYFV
QVPLPEAHSEHPHDTQSSTVRIIDPFVREKIDELLAVGVYELRHIQLIVHDYVNEIIVKK
QMSGYPVNTQSYPSAQDINDYIYLSSISKQSSSGEEEEECESTVERSQVQDEMEKSIQEL
MGLLQSCSDSTTLSKAKKEMKKVIQKMKRCGPVAKNFQRRPRKRNYPTKVILAAEQVKRP
RISQSFTHSQPSCVQIITTSVPQVPQTIVSNSGDILCGNSMSREMMHDVMLPFNGSLNSL
QTHVDMMPTFSRLMEDDHDLMPSLVDRVVGPDPHFHPQLQDLGHLHDERLNSVSH

Nucleotide sequence

Length: 1,924

>KH2012:KH.C2.354.v1.A.ND1-1
TTTTTAATCAGGATTTAAAACAAAAAGTTCATAACCGACACGTGTTTTTAGAGGAATTCC
CACTAAATAGGTATGTAAGCTGAAATGATAAAAAAACATGCAACCCATGTTAACCATATG
GCGTATTAGCCACCAATTCGACTAAATACACGATATCAAAACAAAACCATGGCTTGCAAC
ATTGAAAAGGAAGAAAAATCGGTGTACAGAGTACTTTCAATGTACTTAAACCATGCTGAG
AAGTCTGGGGACTACGTAAAAGGTTCAGTTGATGGGAAAGAAAGATTGGAATTGTTTCTT
AGCGAATACAATCAGTCTGCAAGAACAAAGTTCATTATACGTTCTTCATGTAAGAAGAAT
AAAGAATTCAATCTCGGTGATGCAAACACAGCAACAGAATCCTGTACTCGGTATGGTCGA
GCAGATCGAATTTACTGGGAGTTCAACAATCGAAATCTAATTGTTCCATTTTGCGGAATG
CCTTTTGTTACAAAAAGTTCCCAAGTTAAACATTGTCAGTTTGGTGCTCAATATTATAAA
CTTAAAGAAGAAAAGCAGTCAAAACTAACTCAATCCTGCCATGTTGCTGATGCTCATATG
ACTTCACATAATGATCAGGCTGTTCAGATTTCATCCCAAAAGCGAAGACGCTTAAAGCCA
TCAAAGAAAAGAAACTGCCCAGCTTGCATGTATATTCGGGAAGTTGTACTGTTTCCTGAT
TTTGCCCTGACAACCACCTCATGCACCGTGTCAAAACATGTTTTAAGGAAAAATAAATCA
ACAATAATTCATGATTTAAAGCAAGCGATGGGTGAACGGAAACTTAACACTATACACAGG
TATTTTGTCCAAGTTCCCCTTCCAGAAGCTCATTCAGAACATCCTCACGACACTCAGTCA
TCAACTGTGAGGATAATTGATCCTTTTGTAAGAGAGAAAATTGATGAACTTCTGGCTGTT
GGTGTATATGAGCTGAGACATATCCAGCTAATTGTGCATGATTACGTGAATGAAATCATT
GTGAAAAAACAGATGTCAGGGTATCCTGTCAACACCCAGTCATATCCTTCCGCTCAGGAT
ATCAACGATTATATTTACCTTTCATCAATTTCAAAGCAAAGTTCATCCGGAGAAGAAGAG
GAAGAGTGTGAAAGCACTGTAGAACGATCTCAGGTACAAGATGAGATGGAGAAGAGCATC
CAAGAGTTAATGGGACTTCTGCAGTCATGTAGTGATAGCACAACACTGTCTAAAGCGAAA
AAAGAGATGAAGAAAGTCATCCAGAAGATGAAACGATGCGGTCCAGTTGCCAAAAACTTC
CAACGAAGGCCACGTAAGCGAAACTATCCAACAAAAGTCATCTTGGCTGCTGAGCAGGTA
AAAAGGCCTCGTATTTCACAAAGTTTTACCCATAGCCAACCATCATGTGTTCAAATCATC
ACCACCTCAGTGCCCCAAGTCCCACAAACAATAGTTTCAAACTCTGGAGATATATTGTGT
GGGAACAGTATGAGCAGAGAAATGATGCACGATGTCATGTTGCCATTTAACGGCAGTTTA
AACTCACTTCAAACGCATGTGGACATGATGCCAACATTCAGTAGATTAATGGAGGATGAT
CATGATCTAATGCCATCACTCGTTGACAGAGTAGTTGGTCCAGATCCACATTTTCATCCT
CAATTACAAGACCTTGGCCATCTGCACGATGAAAGATTAAACTCAGTTTCACATTAATTT
TTATGAAGTTTCCAGTGTGTTTGTGTATTTCACGCCTTATGTTCCAATTTGCCTGACATA
CATATTGTTTCCGTTTTTTCTATTTTCTTGTTAACATTCACTTAAACCATGTCTCTTCAT
TTTTATCGCCATACATACTTTGACTAATTTTGTCATTTACCCTGAAAATAAAAAACATAG
TAGC

InterProScan

Pfam
CaRF (IPR029309) - T[99-322] 2.5E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value