- Transcript 'KH2012:KH.C8.227.v1....' >
- Transcript 'KH2012:KH.C3.17.v4.A...' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C2.380.v1....' >
- Transcript 'KH2012:KH.C2.380.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.380.v1.A.SL1-1
Possible name(s)
LARP4; LARP6; LARP7
Gene model
Location
KhC2 [22,775 / 26,783]
Amino acid sequence
Length: 588
>KH.C2.380.v1.A.SL1-1
AVDKSSTKYRAVAKFEMLEPTEPTKACSTAVKGDTGIYDCEKIGEKFTDATTPVVTNDCR
KSGKTTTGYRERIAMNYKDRRSTCKHTTPISLQKRNREFKLQPPFLQPVVQPQPNYMQSG
RILPSFHLVNKHLNQCEHGLPCSYSPNIGHPIQHSPNFGLVTATEVYGTTFYRYERPVFE
GPFPNGFPIIEDLSPAHIHHHCGGNHPHTRPATSIMHPQDSFTPPQSRNSLSSATPNPSS
LSSSSRSSSPFLHSHSDSTRDSGIISTESADEDVPFVLMERRRDIAFEKLLQKIIAIVED
TLSNEKLTKDLYVLRQMRRNSQGYVSLKLVASVKAIKKLTSDYDTVVLALRKSNKLEVNK
SATKVRRKDALPAKSVATSKEPSSLVVVGLPEVEATIESVISKYKEFGTIAQVRILSPKR
PIPAYLQGYVAALPYLGQMWCAIVEYEKPSCTMAAYRELSKRIDELPVTIIGPGFKKNVT
KKFKMYSLLKKEEKTKVVRHNSGDSIDSGADCDSEIFSSGSITSEDGKDDQSMSRCVSEL
LVVAAGFCGEKDKQYEVEDSSLARNLSNLCLKSDISGQTSNNVGVSVT
Nucleotide sequence
Length: 2,744
>KH2012:KH.C2.380.v1.A.SL1-1
GCATTGGTGGTAAAGTGGTATATTTCTGCATCAATTTCACTCAATAGGCTGTTGATAAAA
GTTCCACTAAATATAGAGCTGTTGCAAAATTTGAAATGTTGGAGCCCACTGAGCCAACAA
AAGCTTGCTCGACGGCGGTTAAAGGAGACACCGGGATTTATGACTGTGAGAAAATAGGCG
AGAAATTCACCGACGCAACCACGCCTGTCGTAACAAATGATTGTCGAAAGAGCGGCAAGA
CAACGACTGGTTACCGCGAGAGAATAGCTATGAATTATAAAGATAGGCGGAGTACTTGCA
AACATACAACGCCCATCAGCTTGCAAAAAAGAAATCGTGAATTTAAGTTGCAGCCGCCTT
TTCTTCAACCTGTGGTTCAACCTCAACCAAACTACATGCAAAGTGGTCGAATATTACCGA
GTTTTCATCTGGTGAACAAACATCTTAACCAGTGCGAACACGGCCTACCTTGCTCATATA
GTCCTAACATCGGTCACCCAATTCAACATTCCCCGAACTTCGGGCTTGTAACAGCCACCG
AAGTATATGGCACTACATTCTACAGATATGAACGACCAGTATTCGAAGGACCATTTCCTA
ATGGTTTTCCAATCATAGAAGATCTATCACCTGCACATATTCACCATCACTGTGGTGGTA
ATCATCCGCATACACGCCCAGCAACATCAATCATGCACCCTCAAGACTCGTTTACCCCTC
CTCAATCCCGCAACTCCTTGTCTTCCGCGACTCCAAACCCAAGCTCTCTCTCATCTTCAT
CCAGATCATCTTCTCCCTTCCTCCATTCACACTCCGACTCCACGAGGGACTCCGGAATCA
TTTCAACTGAATCAGCAGATGAAGATGTTCCGTTTGTGCTAATGGAACGAAGAAGAGATA
TTGCGTTTGAAAAATTACTTCAGAAAATTATAGCCATCGTAGAGGATACGTTATCGAATG
AAAAATTGACGAAAGATCTCTACGTGCTTCGGCAGATGCGTCGAAACTCGCAGGGTTACG
TCAGCTTGAAGCTTGTTGCCAGCGTTAAAGCGATAAAGAAGTTAACCAGTGATTACGACA
CCGTGGTTCTAGCTCTTCGCAAATCCAACAAGTTGGAAGTGAACAAGTCGGCAACAAAAG
TTCGTCGAAAAGACGCACTACCGGCGAAATCTGTAGCAACAAGTAAGGAACCTTCATCGT
TGGTGGTGGTTGGTCTACCAGAAGTTGAAGCTACAATAGAGTCGGTAATAAGCAAGTACA
AAGAGTTTGGTACAATCGCCCAAGTGAGAATACTTTCTCCTAAACGCCCAATACCAGCAT
ACCTGCAAGGTTACGTTGCCGCCCTCCCGTATTTGGGTCAGATGTGGTGTGCCATAGTTG
AATACGAAAAGCCATCATGCACGATGGCAGCCTACCGAGAACTTTCCAAAAGGATTGACG
AATTGCCTGTTACAATTATAGGACCAGGATTCAAAAAGAATGTTACGAAAAAATTCAAAA
TGTATTCTCTGTTAAAAAAAGAAGAAAAAACAAAAGTTGTCAGACATAATTCTGGAGATT
CAATTGATTCTGGTGCAGATTGTGATAGCGAGATATTCTCGAGTGGTTCAATCACTTCAG
AAGACGGGAAAGATGATCAGAGCATGAGTCGTTGCGTTAGTGAACTATTGGTTGTTGCTG
CTGGGTTCTGTGGCGAAAAAGACAAACAGTATGAAGTTGAAGATTCTTCCCTTGCCAGGA
ATTTATCGAATCTTTGCCTGAAATCTGACATATCAGGACAAACTTCTAACAATGTTGGTG
TTAGTGTAACTTAAGTATTTCTCCAAACTGTTGCATAAAATGAGTGAAAGTCGTCACAGT
AAGAGGGGGCACTCAGTGAAGAATATGCCCATCAAATTATGAGGCACGAGATATAGTAAC
AAAGTCAAGAAGTTGATGTTATCTGGGTTGGATTTACATTCAATTTATGGTTAAATGTTT
TACAACTCAATGAAGCGATTTAACAAACTAACGTAACAAACGTATCATGCAGATGCTGGT
ATAAGAGACAATACTTGTTAAACAAGACGTGATGAATCGTTTAAGGTGAATTGGGTGCAG
AACAAAAGGTTCAACTTAAGCTACGAGACTGATATCTTTGAAGTATTTTTCCTTTGCACA
TTTTTACAAAAATTAAAATTGTTTTACCTTCAGTCAAAAACGTGCACCATAAACTTTGTT
TTAGAACTAAATGTAGTTTCTTGACGTCAACACTTTTGTTTCATTGTTGTTAATCTTTCT
AAACCATAATAGAACATTCAACTGCACAGTCGTGTGTAGTTTGTGGCAGACACAAAACAA
ACGATATTTACACCAAGTCAGCTTTAACGTGTTCTAAAATGTATCACTTACAATAACTGA
ATACCTCTGTCTTGCGTTACTTGATTTTAGAAGGTTTGAGGCCCTCGCCTATGATTTGCT
GGTCCGGTATGTTAAACCGACAGCGTATAGTAAATAGTAGGAACATTTCGAATACACACC
TGCTGCCTATTTACCATTACGATACCTCATACATACATAGGAGCTGCATGGCCCTCAATT
TTCCACATTACTATTTTGAATGCCCATTTCATCACACAGTTCAACCGCGATCAGTGTTTT
GCGTGCCAATACCTGCGTATATACGTTGTATCGTATTAATTAGTGTGACTTCTTGTATGT
TTGAGTGCTTCCTAGGAAAATTTAATAAAAGCGAAAGAGAAAGT
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[279-377] 7.7E-20 |
| ProSiteProfiles |
La_HTH (IPR006630) - T[284-375] 19.26 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[287-371] 1.81E-15 |
| SMART |
La_HTH (IPR006630) - T[288-368] 6.9E-16 |
| Pfam |
La_HTH (IPR006630) - T[298-352] 1.7E-11 |
| CDD |
LARP6_RRM (IPR034880) - T[383-472] 1.35865E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LARP6_HUMAN | 31.507 % | 99.8 | 3.96E-22 |