- Transcript 'KH2012:KH.C2.421.v4....' >
- Region 'REG00001191' >
- Clone 'cima831738' >
- Transcript 'KH2012:KH.C2.421.v3....'
Transcript Model
Transcript Id
KH2012:KH.C2.421.v3.A.ND1-1
Possible name(s)
BMP2; BMP3; GDF6
Gene model
Location
KhC2 [1,977,432 / 1,985,792]
Amino acid sequence
Length: 547
>KH.C2.421.v3.A.ND1-1
KMYLRQITYTLMMVVCMIAAKPRYRKQKRTTEVVSRRFSNPFFHQSSDIKSADGSMATKL
KNAMKNLPENVKDDAIHEFLNMFGLQAPDNANSIQQIKKPPKYMVDLYNAIADQDGVTRA
PDLLDADTVRSIPNIDSRCPGRCRFDLQAVGEHEVVLDAELHLYFEKPPTRSVSSSRTSN
YMIKIYQILSDGDGEIQKTLVAGRRLPARLLGWQIFPLLTSVETWNSRKDDNLGILVECT
TDNGEVVVQRRGLKGKSPILILFTNDSRNNIHKAKKAKAMQVLHNAKMATISNQKHHISA
TIADIQTSRPRRSLRNENRRQKKNSRKSKNRQNSKHKHQEETNVKSTEDSSFVEYVHHQT
KNTTTLSKKNNGNHDTETIYTDDQFQGQEYDSNIWETYDLDYASDGSTKPAAETSHSRHP
VSTSSAHFPSFSSLSTEASASRHCRRYPLYVDFEEMGWSGWIIHPQGYNAYHCRGKCSFP
ISQNLKPSNHATVQSIMHTLGLGGQPVDMPCCTPDKLYDINLLYFDHNDYVVLRRYKDMV
AASCACR
Nucleotide sequence
Length: 2,465
>KH2012:KH.C2.421.v3.A.ND1-1
AAAAATCACTGTAAATGTTAGATTGAATGGACGATTAATATTTCTATTTAGTTAATTAAA
CAGCTTTCGATGGAGGTGATGATCACTCTAAAGAAGTAAAGAAGTTTTCCGTGATTCTCT
CCCTTCTTTCTTCGAGAAAAGTGCACTTACCGATTCAACTTTTCGATCGCATTTTCGCCA
GAGCTTTCTGAGTGCAGGTGTATGGTCGACTGGTTTGGTTTTTGAGGACCCCTAGAGTGC
TTACCACCGCAACACTGATAACGTGTTATCTACGGTTTACGGACAACTGCTGCGCTGCTC
GTTCTCTCGGTCGACGCTCGTCGTATGTTTGCGAATTTTCGTACATCCGGAGATCAAATA
TCAGCGGGTGATTGAATGATCGGTCCGATTTAAGTGACAGGACTTCACCGACAGCACAGT
AGATAAGCGGAGCAGAAGAATTTGGACACTCACATTGAGTTTGACATCTCAGGAAACAGA
TATATAGAAAGCAAACTACACGATACCAAAAACAATAGAAGATGTATCTTAGGCAGATAA
CTTATACGTTAATGATGGTGGTTTGCATGATTGCCGCAAAGCCTCGCTACAGAAAGCAGA
AACGCACAACTGAAGTGGTCAGCAGAAGATTCTCAAATCCATTCTTCCACCAAAGCTCAG
ATATAAAATCCGCCGATGGAAGCATGGCAACTAAGCTGAAAAACGCAATGAAGAACTTGC
CAGAAAATGTTAAAGATGACGCGATACATGAGTTTCTCAACATGTTCGGTTTACAGGCTC
CGGATAATGCCAACTCTATCCAACAAATCAAGAAACCGCCCAAGTACATGGTGGATCTTT
ATAATGCTATTGCAGATCAAGATGGTGTGACGCGGGCCCCGGATCTGTTGGATGCAGACA
CCGTCAGAAGCATTCCCAACATAGACTCGAGGTGCCCAGGTCGATGTCGTTTTGATTTGC
AAGCAGTGGGTGAACACGAGGTGGTTTTGGATGCGGAACTTCATCTTTACTTTGAAAAAC
CTCCAACGCGTTCAGTTTCTTCCAGCAGGACCAGCAACTACATGATTAAAATTTATCAGA
TATTGTCGGACGGAGACGGAGAAATACAGAAAACACTCGTTGCAGGAAGGCGCCTTCCAG
CCCGATTATTAGGGTGGCAGATATTTCCTCTTCTTACCTCCGTTGAAACTTGGAATAGCC
GGAAAGATGACAATTTAGGCATTCTTGTTGAATGCACAACTGATAATGGCGAGGTGGTCG
TTCAGCGAAGAGGGTTGAAAGGAAAATCCCCAATTCTAATACTCTTCACAAACGACAGCA
GAAACAACATCCACAAAGCTAAGAAAGCAAAAGCAATGCAAGTTCTACACAATGCAAAAA
TGGCAACGATAAGCAATCAAAAACACCACATATCAGCAACAATTGCCGACATTCAAACTT
CAAGACCTCGAAGGTCGCTAAGAAATGAGAATAGAAGACAGAAAAAGAATTCACGAAAAA
GCAAAAACCGTCAAAATTCGAAACATAAGCACCAGGAAGAAACAAATGTGAAAAGTACCG
AAGATTCTAGCTTTGTCGAATATGTACATCACCAAACAAAAAACACAACCACATTGTCCA
AAAAGAATAACGGCAATCACGACACAGAAACCATATATACAGATGATCAATTTCAAGGGC
AAGAATATGATTCCAATATATGGGAGACATATGATCTTGATTATGCATCTGATGGCAGCA
CCAAACCAGCGGCAGAAACTTCGCATTCTCGCCATCCAGTTAGTACGTCATCTGCACATT
TCCCTTCGTTTTCAAGTCTTTCCACTGAAGCATCGGCAAGTCGACATTGCCGTCGTTACC
CTTTATATGTCGACTTTGAAGAAATGGGTTGGTCAGGTTGGATTATTCACCCTCAAGGTT
ACAACGCATACCACTGCCGAGGAAAGTGTTCCTTTCCAATAAGTCAGAATTTGAAACCAA
GCAACCACGCGACGGTACAAAGCATCATGCATACTCTCGGTCTTGGGGGACAGCCTGTGG
ACATGCCTTGCTGCACACCCGACAAACTGTACGATATAAATCTGTTATACTTTGACCACA
ATGATTATGTTGTCCTGAGACGATACAAGGACATGGTTGCTGCATCGTGTGCCTGCAGAT
GAATTCAATCTTGGTATTCATCTCATACAACCGGTATGGTGTCCAGCAGCGAAAGCCGGC
CGTGGTTCTACACGACAGTGGAGGAGTCAACAGAACACAAAGCTCCCTAAAATTTATTGC
AATGTTTAGCGCACTTGCACTGTTTAAGATAAAATTGTCTTGTTTTGCGTTTACTTCGTT
ACTAGATTAACATGCCTGAGAATCGGTGCGATTTTCGTTCCGTGATTTCGTCCTTATACG
TCATGTCGAGTGGAATACATGTATCGCGCATACCTTTGAACAAACCGCAATAAAAACAAG
ATTGC
| PANTHER |
TGF-beta-rel (IPR015615) - T[2-547] 2.4E-134 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[65-253] 5.1E-21 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[418-547] 36.679 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[432-547] 4.6E-37 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[439-547] 2.97E-36 |
| Pfam |
TGF-b_C (IPR001839) - T[443-546] 8.1E-30 |
| SMART |
TGF-b_C (IPR001839) - T[444-547] 3.4E-54 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[462-477] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BMP3_HUMAN | 49.057 % | 126 | 2.65E-31 |
| GDF6_HUMAN | 44.628 % | 120 | 2.04E-29 |
| BMP2_HUMAN | 44.231 % | 121 | 6.43E-30 |