- Transcript 'KH2012:KH.C2.422.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.422.v1.A.SL5-1
Possible name(s)
PRICKLE1; PRICKLE2; TES
Gene model
Location
KhC2 [3,332,584 / 3,339,487]
Amino acid sequence
Length: 562
>KH.C2.422.v1.A.SL5-1
GDTANMSANGKIVSGVTEKVLTHEVGAGAPCLKCGDKCPGLDLHFWRKICRNCKCKQEDH
DVLTSVSTRGIDNIGKLLMQDQDVQPEPTIKSTSPKKSTSPTKNTDKHHKPPVAAPATAP
KPNRVTTTAVHEIPNTDQVVPNADQGLNVTIDIGGKKHTLDFGTNDKQVDDSLPSPPNDF
PPPPPASEDHAFPAPPPMENSELPPTVPPLPEEFQTKAVLTEKEQSPVKQATPPQSQSPQ
KNAHPAGNVAVLTTYSNSSSPTKSVGKARKSSTSSSDDGEVEYEWTPPSSDPKLIDSYVR
ALPKDKQPIVGTAGAKHRKKQLMRQLPSHDQEPSECHDLTEQETKEMSLFVKQYREKALG
VAKIEENPKLKSCAECRNPLDEGDVVVWAERTGTERYWHPACFSCSECKELLVDLIYFYH
DDRIYCGRHYCELHKPRCAACDELIFAPEYTQAEDCYWHLKHFCCWHCDQPLGGKNYVPH
DNQPVCIPCYEKSFAHTCSTCNEIIAPNTEWVTFEEHHWHAHSDCFKCSQCSQSLVGKPC
IPKGSMVFCCSKCKREKLPPAQ
Nucleotide sequence
Length: 2,342
>KH2012:KH.C2.422.v1.A.SL5-1
CATTAAGATAATTACCCTTCTATTCCTGTAGTTGAAGTCATTTTGCCGTAGGCTTAAAGT
CTAATACAGGAACTATAGCAACGGTTTGTGGATAAACAGCAATTGCTTTTATACATAGTG
GATTAACCGTAGGCAACTATAGCTGTTGTGTCATTAGGGGGACACAGCTAATATGAGTGC
GAATGGCAAGATAGTGTCCGGTGTAACCGAGAAAGTTCTCACACATGAAGTAGGGGCGGG
CGCTCCATGTTTAAAATGTGGTGATAAGTGCCCGGGTCTAGATCTACATTTTTGGAGAAA
AATATGTCGAAACTGCAAGTGTAAGCAAGAAGATCATGACGTTCTCACCTCTGTGTCAAC
CCGTGGTATTGACAACATCGGTAAGCTACTTATGCAAGATCAAGACGTACAACCGGAACC
AACGATAAAATCAACATCACCGAAAAAATCAACATCACCGACGAAAAATACGGACAAACA
TCACAAACCCCCAGTTGCTGCGCCGGCTACCGCGCCAAAACCGAACAGAGTTACAACTAC
AGCGGTTCATGAAATCCCCAACACCGACCAGGTCGTCCCCAACGCCGACCAGGGGTTGAA
TGTAACTATTGATATAGGAGGGAAAAAACACACTCTTGATTTCGGTACGAACGACAAGCA
GGTCGACGATTCTCTTCCCTCCCCTCCGAATGATTTCCCTCCTCCCCCTCCCGCATCCGA
GGACCATGCCTTCCCTGCTCCCCCGCCGATGGAGAATTCGGAACTACCCCCGACGGTCCC
TCCTCTTCCAGAAGAGTTCCAAACGAAGGCAGTTCTTACAGAAAAAGAGCAGTCGCCTGT
AAAACAAGCGACTCCTCCTCAAAGCCAATCTCCACAGAAGAACGCACACCCAGCGGGAAA
TGTAGCTGTGCTGACGACATATTCAAACAGCTCTTCACCAACGAAATCGGTTGGTAAAGC
AAGGAAGAGTTCAACATCTTCCAGTGATGACGGAGAGGTGGAATACGAATGGACTCCTCC
GTCTTCGGATCCAAAACTGATCGACAGCTACGTGAGAGCCCTCCCTAAGGACAAACAGCC
CATTGTAGGCACCGCAGGAGCGAAACACAGGAAGAAACAACTGATGAGGCAACTACCGTC
TCATGATCAAGAGCCAAGCGAATGTCATGACCTTACCGAGCAAGAAACGAAAGAAATGTC
GCTTTTCGTGAAGCAGTATAGAGAGAAGGCATTAGGAGTCGCTAAAATAGAAGAAAACCC
AAAACTAAAGTCGTGCGCCGAGTGTCGCAACCCATTGGACGAAGGAGACGTGGTAGTGTG
GGCAGAACGTACAGGCACCGAGCGGTATTGGCACCCGGCGTGTTTTAGCTGTTCCGAGTG
CAAGGAACTGCTGGTGGATCTTATTTATTTTTACCACGACGACAGGATCTACTGTGGTCG
ACACTACTGCGAGTTACACAAACCACGCTGTGCCGCCTGTGACGAGCTTATATTCGCACC
CGAGTACACGCAAGCGGAAGATTGTTACTGGCATCTGAAGCACTTCTGCTGCTGGCATTG
CGACCAACCTTTGGGTGGTAAGAATTACGTTCCACACGACAACCAACCGGTCTGTATTCC
TTGCTATGAGAAATCGTTCGCCCACACTTGCTCAACATGTAATGAGATAATCGCACCAAA
CACAGAGTGGGTAACCTTCGAAGAACATCACTGGCACGCTCACTCTGACTGCTTTAAGTG
TAGCCAATGTAGTCAATCGCTTGTGGGAAAGCCGTGTATTCCAAAAGGAAGCATGGTGTT
TTGCTGCAGCAAGTGCAAACGGGAAAAACTACCACCAGCCCAGTAAAACAGATACAGAAA
AAAATGATTGGTCAAATTGGGACGGTGAAAAAATACCACTGATTTTTCTTTATGTAATTC
TACTCGAAGGAATTGAAATAACCACCCGCTTGCTTGATTGCGCAATATAAACTCGTGAAT
GAACGTATCCGCATTTCAGCATTGAACATCAACACGCCGGCACTGCATCGCTGTACTAAG
GTATCAGCACTTCACGTTTAAGCTGCGATTCTTTCTTGTCTTTTCTTTCCATCGGTCGGT
GCAATTCTTCACCCAACATTCCGTGCTACACACTCTTTACACTTACTCGATCTCGCCAAT
ATCTCAGATACCTTCTGTATTCAACCAATGCTAGTTGTAATTCCCACAACGATGTGTGGT
TTTGCTGATACATGCAGTATAGCGTCGGACTTAATGAACACCACTTAATTCTTACTTGAC
GGTTTCAATCGCAGCTTATTTTGACTAACTTCTAGTACAAACCGATGTAAAATACACTAA
CG
| ProSiteProfiles |
PET_domain (IPR010442) - T[264-372] 35.091 |
| Pfam |
PET_domain (IPR010442) - T[281-364] 1.1E-34 |
| CDD |
PET_testin (IPR033724) - T[281-368] 8.19178E-44 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[371-436] 12.821 - T[437-495] 8.049 - T[496-560] 10.662 |
| SMART |
Znf_LIM (IPR001781) - T[372-429] 5.4E-12 - T[437-489] 1.0E-13 - T[497-552] 2.4E-11 |
| Pfam |
Znf_LIM (IPR001781) - T[373-433] 6.2E-11 - T[438-494] 2.8E-11 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[438-472] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 43.434 % | 275 | 6.78E-83 |
| PRIC1_HUMAN | 45.862 % | 279 | 2.25E-84 |
| TES_HUMAN | 46.452 % | 302 | 1.33E-97 |