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  1. Clone 'cign039i24'
  2. EST 'FF945275.1'
  3. Transcript 'KH2012:KH.C2.422.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.422.v2.A.SL1-1

Possible name(s)

PRICKLE1; PRICKLE2; TES

Location

KhC2 [3,332,584 / 3,339,369]

Sequences

Amino acid sequence

Length: 517

>KH.C2.422.v2.A.SL1-1
GDTANMSANGKIVSGVTEKVLTHEVGAGAPCLKCGDKCPGLDLHFWRKICRNCKCKQEDH
DVLTSVSTRGIDNIGKLLMQDQDVQPEPTIKSTSPKKSTSPTKNTDKHHKPPVAAPATAP
KPNRVTTTAVHEIPNTDQVVPNADQGLNVTIDIGGKKHTLDFGTNDKQVDDSLPSPPNDF
PPPPPASEDHAFPAPPPMENSELPPTVPPLPEEFQTKAVLTEKEQSPVKQATPPQSQSPQ
KNAHPAGNVAVLTTYSNSSSPTKSVGKARKSSTSSSDDGEVEYEWTPPSSDPKLIDSYVR
ALPKDKQPIVGTAGAKHRKKQLMRQLPSHDQEPSECHDLTEQETKEMSLFVKQYREKALG
VAKIEENPKLKSCAECRNPLDEGDVVVWAERTGTERYWHPACFSCSECKELLVDLIYFYH
DDRIYCGRHYCELHKPRCAACDELIFAPEYTQAEDCYWHLKHFCCWHCDQPLGGKNYVPH
DNQPVCIPCYEKSFAHTCSTCNEKKMIGQIGTVKKYH

Nucleotide sequence

Length: 2,033

>KH2012:KH.C2.422.v2.A.SL1-1
TGGATTAACCGTAGGCAACTATAGCTGTTGTGTCATTAGGGGGACACAGCTAATATGAGT
GCGAATGGCAAGATAGTGTCCGGTGTAACCGAGAAAGTTCTCACACATGAAGTAGGGGCG
GGCGCTCCATGTTTAAAATGTGGTGATAAGTGCCCGGGTCTAGATCTACATTTTTGGAGA
AAAATATGTCGAAACTGCAAGTGTAAGCAAGAAGATCATGACGTTCTCACCTCTGTGTCA
ACCCGTGGTATTGACAACATCGGTAAGCTACTTATGCAAGATCAAGACGTACAACCGGAA
CCAACGATAAAATCAACATCACCGAAAAAATCAACATCACCGACGAAAAATACGGACAAA
CATCACAAACCCCCAGTTGCTGCGCCGGCTACCGCGCCAAAACCGAACAGAGTTACAACT
ACAGCGGTTCATGAAATCCCCAACACCGACCAGGTCGTCCCCAACGCCGACCAGGGGTTG
AATGTAACTATTGATATAGGAGGGAAAAAACACACTCTTGATTTCGGTACGAACGACAAG
CAGGTCGACGATTCTCTTCCCTCCCCTCCGAATGATTTCCCTCCTCCCCCTCCCGCATCC
GAGGACCATGCCTTCCCTGCTCCCCCGCCGATGGAGAATTCGGAACTACCCCCGACGGTC
CCTCCTCTTCCAGAAGAGTTCCAAACGAAGGCAGTTCTTACAGAAAAAGAGCAGTCGCCT
GTAAAACAAGCGACTCCTCCTCAAAGCCAATCTCCACAGAAGAACGCACACCCAGCGGGA
AATGTAGCTGTGCTGACGACATATTCAAACAGCTCTTCACCAACGAAATCGGTTGGTAAA
GCAAGGAAGAGTTCAACATCTTCCAGTGATGACGGAGAGGTGGAATACGAATGGACTCCT
CCGTCTTCGGATCCAAAACTGATCGACAGCTACGTGAGAGCCCTCCCTAAGGACAAACAG
CCCATTGTAGGCACCGCAGGAGCGAAACACAGGAAGAAACAACTGATGAGGCAACTACCG
TCTCATGATCAAGAGCCAAGCGAATGTCATGACCTTACCGAGCAAGAAACGAAAGAAATG
TCGCTTTTCGTGAAGCAGTATAGAGAGAAGGCATTAGGAGTCGCTAAAATAGAAGAAAAC
CCAAAACTAAAGTCGTGCGCCGAGTGTCGCAACCCATTGGACGAAGGAGACGTGGTAGTG
TGGGCAGAACGTACAGGCACCGAGCGGTATTGGCACCCGGCGTGTTTTAGCTGTTCCGAG
TGCAAGGAACTGCTGGTGGATCTTATTTATTTTTACCACGACGACAGGATCTACTGTGGT
CGACACTACTGCGAGTTACACAAACCACGCTGTGCCGCCTGTGACGAGCTTATATTCGCA
CCCGAGTACACGCAAGCGGAAGATTGTTACTGGCATCTGAAGCACTTCTGCTGCTGGCAT
TGCGACCAACCTTTGGGTGGTAAGAATTACGTTCCACACGACAACCAACCGGTCTGTATT
CCTTGCTATGAGAAATCGTTCGCCCACACTTGCTCAACATGTAATGAGAAAAAAATGATT
GGTCAAATTGGGACGGTGAAAAAATACCACTGATTTTTCTTTATGTAATTCTACTCGAAG
GAATTGAAATAACCACCCGCTTGCTTGATTGCGCAATATAAACTCGTGAATGAACGTATC
CGCATTTCAGCATTGAACATCAACACGCCGGCACTGCATCGCTGTACTAAGGTATCAGCA
CTTCACGTTTAAGCTGCGATTCTTTCTTGTCTTTTCTTTCCATCGGTCGGTGCAATTCTT
CACCCAACATTCCGTGCTACACACTCTTTACACTTACTCGATCTCGCCAATATCTCAGAT
ACCTTCTGTATTCAACCAATGCTAGTTGTAATTCCCACAACGATGTGTGGTTTTGCTGAT
ACATGCAGTATAGCGTCGGACTTAATGAACACCACTTAATTCTTACTTGACGGTTTCAAT
CGCAGCTTATTTTGACTAACTTCTAGTACAAACCGATGTAAAATACACTAACG

InterProScan

ProSiteProfiles
PET_domain (IPR010442) - T[264-372] 35.091
Pfam
PET_domain (IPR010442) - T[281-364] 9.8E-35
CDD
PET_testin (IPR033724) - T[281-368] 7.34093E-44
ProSiteProfiles
Znf_LIM (IPR001781) - T[371-436] 12.821 - T[437-496] 10.187
SMART
Znf_LIM (IPR001781) - T[372-429] 5.4E-12 - T[437-489] 1.0E-13
Pfam
Znf_LIM (IPR001781) - T[373-433] 5.1E-11 - T[438-494] 2.5E-11
ProSitePatterns
Znf_LIM (IPR001781) - T[438-472] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PRIC2_HUMAN 44.269 % 233 7.9E-68
PRIC1_HUMAN 47.5 % 237 2.84E-69
TES_HUMAN 47.471 % 256 2.81E-80





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