- Transcript 'KH2012:KH.C2.422.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.422.v2.A.SL4-1
Possible name(s)
PRICKLE1; PRICKLE2; TES
Gene model
Location
KhC2 [3,332,584 / 3,339,436]
Amino acid sequence
Length: 517
>KH.C2.422.v2.A.SL4-1
GDTANMSANGKIVSGVTEKVLTHEVGAGAPCLKCGDKCPGLDLHFWRKICRNCKCKQEDH
DVLTSVSTRGIDNIGKLLMQDQDVQPEPTIKSTSPKKSTSPTKNTDKHHKPPVAAPATAP
KPNRVTTTAVHEIPNTDQVVPNADQGLNVTIDIGGKKHTLDFGTNDKQVDDSLPSPPNDF
PPPPPASEDHAFPAPPPMENSELPPTVPPLPEEFQTKAVLTEKEQSPVKQATPPQSQSPQ
KNAHPAGNVAVLTTYSNSSSPTKSVGKARKSSTSSSDDGEVEYEWTPPSSDPKLIDSYVR
ALPKDKQPIVGTAGAKHRKKQLMRQLPSHDQEPSECHDLTEQETKEMSLFVKQYREKALG
VAKIEENPKLKSCAECRNPLDEGDVVVWAERTGTERYWHPACFSCSECKELLVDLIYFYH
DDRIYCGRHYCELHKPRCAACDELIFAPEYTQAEDCYWHLKHFCCWHCDQPLGGKNYVPH
DNQPVCIPCYEKSFAHTCSTCNEKKMIGQIGTVKKYH
Nucleotide sequence
Length: 2,100
>KH2012:KH.C2.422.v2.A.SL4-1
GCTTAAAGTCTAATACAGGAACTATAGCAACGGTTTGTGGATAAACAGCAATTGCTTTTA
TACATAGTGGATTAACCGTAGGCAACTATAGCTGTTGTGTCATTAGGGGGACACAGCTAA
TATGAGTGCGAATGGCAAGATAGTGTCCGGTGTAACCGAGAAAGTTCTCACACATGAAGT
AGGGGCGGGCGCTCCATGTTTAAAATGTGGTGATAAGTGCCCGGGTCTAGATCTACATTT
TTGGAGAAAAATATGTCGAAACTGCAAGTGTAAGCAAGAAGATCATGACGTTCTCACCTC
TGTGTCAACCCGTGGTATTGACAACATCGGTAAGCTACTTATGCAAGATCAAGACGTACA
ACCGGAACCAACGATAAAATCAACATCACCGAAAAAATCAACATCACCGACGAAAAATAC
GGACAAACATCACAAACCCCCAGTTGCTGCGCCGGCTACCGCGCCAAAACCGAACAGAGT
TACAACTACAGCGGTTCATGAAATCCCCAACACCGACCAGGTCGTCCCCAACGCCGACCA
GGGGTTGAATGTAACTATTGATATAGGAGGGAAAAAACACACTCTTGATTTCGGTACGAA
CGACAAGCAGGTCGACGATTCTCTTCCCTCCCCTCCGAATGATTTCCCTCCTCCCCCTCC
CGCATCCGAGGACCATGCCTTCCCTGCTCCCCCGCCGATGGAGAATTCGGAACTACCCCC
GACGGTCCCTCCTCTTCCAGAAGAGTTCCAAACGAAGGCAGTTCTTACAGAAAAAGAGCA
GTCGCCTGTAAAACAAGCGACTCCTCCTCAAAGCCAATCTCCACAGAAGAACGCACACCC
AGCGGGAAATGTAGCTGTGCTGACGACATATTCAAACAGCTCTTCACCAACGAAATCGGT
TGGTAAAGCAAGGAAGAGTTCAACATCTTCCAGTGATGACGGAGAGGTGGAATACGAATG
GACTCCTCCGTCTTCGGATCCAAAACTGATCGACAGCTACGTGAGAGCCCTCCCTAAGGA
CAAACAGCCCATTGTAGGCACCGCAGGAGCGAAACACAGGAAGAAACAACTGATGAGGCA
ACTACCGTCTCATGATCAAGAGCCAAGCGAATGTCATGACCTTACCGAGCAAGAAACGAA
AGAAATGTCGCTTTTCGTGAAGCAGTATAGAGAGAAGGCATTAGGAGTCGCTAAAATAGA
AGAAAACCCAAAACTAAAGTCGTGCGCCGAGTGTCGCAACCCATTGGACGAAGGAGACGT
GGTAGTGTGGGCAGAACGTACAGGCACCGAGCGGTATTGGCACCCGGCGTGTTTTAGCTG
TTCCGAGTGCAAGGAACTGCTGGTGGATCTTATTTATTTTTACCACGACGACAGGATCTA
CTGTGGTCGACACTACTGCGAGTTACACAAACCACGCTGTGCCGCCTGTGACGAGCTTAT
ATTCGCACCCGAGTACACGCAAGCGGAAGATTGTTACTGGCATCTGAAGCACTTCTGCTG
CTGGCATTGCGACCAACCTTTGGGTGGTAAGAATTACGTTCCACACGACAACCAACCGGT
CTGTATTCCTTGCTATGAGAAATCGTTCGCCCACACTTGCTCAACATGTAATGAGAAAAA
AATGATTGGTCAAATTGGGACGGTGAAAAAATACCACTGATTTTTCTTTATGTAATTCTA
CTCGAAGGAATTGAAATAACCACCCGCTTGCTTGATTGCGCAATATAAACTCGTGAATGA
ACGTATCCGCATTTCAGCATTGAACATCAACACGCCGGCACTGCATCGCTGTACTAAGGT
ATCAGCACTTCACGTTTAAGCTGCGATTCTTTCTTGTCTTTTCTTTCCATCGGTCGGTGC
AATTCTTCACCCAACATTCCGTGCTACACACTCTTTACACTTACTCGATCTCGCCAATAT
CTCAGATACCTTCTGTATTCAACCAATGCTAGTTGTAATTCCCACAACGATGTGTGGTTT
TGCTGATACATGCAGTATAGCGTCGGACTTAATGAACACCACTTAATTCTTACTTGACGG
TTTCAATCGCAGCTTATTTTGACTAACTTCTAGTACAAACCGATGTAAAATACACTAACG
| ProSiteProfiles |
PET_domain (IPR010442) - T[264-372] 35.091 |
| Pfam |
PET_domain (IPR010442) - T[281-364] 9.8E-35 |
| CDD |
PET_testin (IPR033724) - T[281-368] 7.34093E-44 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[371-436] 12.821 - T[437-496] 10.187 |
| SMART |
Znf_LIM (IPR001781) - T[372-429] 5.4E-12 - T[437-489] 1.0E-13 |
| Pfam |
Znf_LIM (IPR001781) - T[373-433] 5.1E-11 - T[438-494] 2.5E-11 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[438-472] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 44.269 % | 233 | 7.9E-68 |
| PRIC1_HUMAN | 47.5 % | 237 | 2.84E-69 |
| TES_HUMAN | 47.471 % | 256 | 2.81E-80 |