- Transcript 'NCBI:KH.XM_018811846...' >
- Transcript 'KH2012:KH.L18.39.v2....' >
- Transcript 'KH2012:KH.C8.551.v2....' >
- Region 'REG00000340' >
- Transcript 'KH2012:KH.C2.471.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.471.v2.A.nonSL13-1
Possible name(s)
DDX17; DDX42; DDX5
Gene model
Location
KhC2 [80,477 / 82,633]
>KH.C2.471.v2.A.nonSL13-1
YFSIYIILTVTRMPGYGSRDRGGDRGYGSYGGGRSNGSYGGGNDRWGGRGGGGGGRGRSD
RGGKYDNSAGSGLRKPKWDCEKLTPFQKEFYQEHPSTAGRPVHHVQEYYQKHEVTVTGSN
LKKPVLFFHEASFPDYINNQLLSNGFKAPTPIQAIGWPHALGGQDLVGIAQTGSGKTLSF
ILPAMIHINAQPYLERGDGPIALVLCPTRELAQQVQAVANDYGQLCHIRNTCVYGGASKA
PQIRDLERGCEIVIATPGRLIDFLEARKTNLRRCTYLVLDEADRMLDMGFEPQIRKIIDQ
IRPDRQTLMWSATWPKEVQKLANDFLRDNVHIQIGSVNISANHNILQIVDVCTEDEKSEK
LMRLMEEIMGEAENKTIIFTETKRKCDILTRNMRRDGWPAMCIHGDKSQPERDWVLNEFR
TGKSPILVATDVASRGLDVSDIKFVINFDFPNQCEDYIHRIGRTARANQTGTAYTFFTQA
NAKQCKDLIEILKEAKQQINPRLMELAQSSWGNFGKNRRGGGSSRGGYGYGGGRSNGFGG
AGGQRSSGGYNNSGAYGGKPAGAYGGQQTNGYAKPQQNFGNMAGTQFMMMPGGPVPM
>KH2012:KH.C2.471.v2.A.nonSL13-1
TATATTTTTCAATTTACATTATACTTACTGTAACAAGAATGCCCGGTTATGGTTCAAGAG
ATCGTGGAGGTGACCGTGGTTACGGCAGCTATGGAGGGGGACGTAGTAATGGCTCTTATG
GAGGAGGAAACGATCGCTGGGGAGGAAGGGGAGGTGGGGGAGGCGGAAGAGGAAGATCGG
ATCGAGGTGGGAAATATGACAACTCTGCTGGAAGCGGTCTCCGCAAGCCAAAGTGGGATT
GTGAAAAGTTAACTCCGTTTCAAAAAGAATTTTATCAAGAACATCCAAGTACTGCAGGAA
GACCAGTCCATCATGTTCAAGAATATTATCAGAAGCATGAGGTTACAGTTACTGGGTCAA
ACTTAAAGAAACCTGTGCTTTTCTTTCATGAGGCAAGTTTTCCAGATTACATTAATAATC
AGTTGCTGTCCAATGGATTTAAGGCACCAACTCCTATACAAGCAATTGGTTGGCCACATG
CACTTGGCGGTCAAGATCTTGTTGGGATTGCTCAAACTGGATCTGGTAAAACACTCTCAT
TTATTTTGCCAGCTATGATTCACATTAATGCTCAGCCATATCTTGAAAGAGGAGATGGTC
CAATTGCTCTTGTACTTTGCCCTACAAGGGAGTTGGCACAACAAGTTCAAGCAGTTGCAA
ATGATTATGGGCAGCTTTGCCACATTAGGAATACCTGTGTATATGGTGGGGCATCAAAAG
CCCCTCAAATTAGAGATTTGGAGAGAGGTTGTGAAATCGTGATCGCTACACCAGGTCGCC
TTATTGATTTTCTAGAAGCCCGCAAGACAAACCTTCGCAGATGTACTTACTTGGTTCTTG
ATGAAGCTGACAGAATGTTGGACATGGGTTTTGAACCACAAATACGAAAAATTATTGATC
AGATTCGTCCAGACAGACAAACACTGATGTGGAGTGCAACATGGCCAAAGGAAGTTCAAA
AGCTCGCAAATGATTTTCTCAGAGATAATGTTCATATCCAAATTGGATCTGTGAATATTT
CTGCGAATCACAATATTCTACAAATCGTTGATGTTTGTACAGAAGATGAAAAATCCGAAA
AGCTAATGAGATTGATGGAAGAAATAATGGGAGAGGCAGAGAATAAGACAATCATATTCA
CAGAAACTAAGAGAAAATGTGATATTCTCACTCGCAACATGAGGCGTGATGGTTGGCCTG
CCATGTGTATTCATGGTGACAAATCCCAACCAGAGAGAGATTGGGTTTTAAATGAGTTTC
GAACAGGAAAGTCTCCAATTCTGGTTGCAACAGACGTGGCATCACGTGGTCTTGATGTTT
CAGATATCAAATTTGTCATAAATTTTGATTTTCCAAATCAATGTGAAGATTACATTCATC
GAATTGGGCGAACAGCAAGAGCGAATCAAACTGGAACTGCATACACATTTTTCACACAAG
CCAATGCTAAGCAGTGCAAAGATTTAATTGAAATCCTTAAGGAGGCAAAGCAGCAAATTA
ACCCAAGGTTGATGGAGTTGGCTCAATCATCATGGGGAAATTTCGGTAAGAATCGCAGAG
GTGGTGGCAGTAGTCGTGGAGGTTATGGTTACGGAGGAGGCAGAAGCAATGGTTTTGGTG
GAGCTGGTGGACAACGTAGTAGTGGTGGCTACAACAACAGTGGTGCCTATGGTGGAAAAC
CAGCTGGTGCATATGGGGGACAGCAAACAAATGGTTACGCAAAACCACAACAAAATTTTG
GTAACATGGCAGGTACACAGTTTATGATGATGCCAGGAGGTCCAGTCCCAATGTAAAAGA
AACATTCCTAACAATGTATTTTAATCCACTAGTTTGTAATGCTTGTGTAAAGTTGAGCAC
AATCATACTTGGAAGAAAGGCTATTCTCTTCGTTTGCGCTGTAATATTTTCCAGTTACTA
CTACATAATACAGTCTGCTGCTTTAACCGAAACCAAGCTTGGTTGTTGGTATGTAGCTTC
AGCTTGTATATACCATGTTATTAGACCACTTTTGTTCTTGATTTTAGCATTATTTATCAA
CCACGAATTTAGGCCAATTTTCTTTATTACTAAGTTATCTAACCGAACTTGCTGATTTTA
GGCGTTATGCCAGTGAGCTCGTAGCGTACCATGTAAAATAAATTCTTTCAAAACAA
ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[126-154] 9.737 |
SMART |
Helicase_ATP-bd (IPR014001) - T[145-348] 1.5E-64 |
Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[150-321] 6.4E-48 |
ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[157-332] 32.031 |
SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[198-486] 5.86E-76 |
ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[278-286] . |
CDD |
Helicase_C (IPR001650) - T[344-476] 3.69334E-42 |
Pfam |
Helicase_C (IPR001650) - T[360-468] 1.1E-29 |
ProSiteProfiles |
Helicase_C (IPR001650) - T[360-507] 25.029 |
SMART |
Helicase_C (IPR001650) - T[387-468] 1.9E-32 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
DDX17_HUMAN | 62.715 % | 667 | 0 |
DDX5_HUMAN | 57.869 % | 669 | 0 |
DDX42_HUMAN | 41.63 % | 358 | 8.33E-113 |