- Transcript 'KH2012:KH.C2.471.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.471.v2.A.nonSL15-1
Possible name(s)
DDX17; DDX42; DDX5
Gene model
Location
KhC2 [80,477 / 82,610]
>KH.C2.471.v2.A.nonSL15-1
LTVTRMPGYGSRDRGGDRGYGSYGGGRSNGSYGGGNDRWGGRGGGGGGRGRSDRGGKYDN
SAGSGLRKPKWDCEKLTPFQKEFYQEHPSTAGRPVHHVQEYYQKHEVTVTGSNLKKPVLF
FHEASFPDYINNQLLSNGFKAPTPIQAIGWPHALGGQDLVGIAQTGSGKTLSFILPAMIH
INAQPYLERGDGPIALVLCPTRELAQQVQAVANDYGQLCHIRNTCVYGGASKAPQIRDLE
RGCEIVIATPGRLIDFLEARKTNLRRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQT
LMWSATWPKEVQKLANDFLRDNVHIQIGSVNISANHNILQIVDVCTEDEKSEKLMRLMEE
IMGEAENKTIIFTETKRKCDILTRNMRRDGWPAMCIHGDKSQPERDWVLNEFRTGKSPIL
VATDVASRGLDVSDIKFVINFDFPNQCEDYIHRIGRTARANQTGTAYTFFTQANAKQCKD
LIEILKEAKQQINPRLMELAQSSWGNFGKNRRGGGSSRGGYGYGGGRSNGFGGAGGQRSS
GGYNNSGAYGGKPAGAYGGQQTNGYAKPQQNFGNMAGTQFMMMPGGPVPM
>KH2012:KH.C2.471.v2.A.nonSL15-1
CTTACTGTAACAAGAATGCCCGGTTATGGTTCAAGAGATCGTGGAGGTGACCGTGGTTAC
GGCAGCTATGGAGGGGGACGTAGTAATGGCTCTTATGGAGGAGGAAACGATCGCTGGGGA
GGAAGGGGAGGTGGGGGAGGCGGAAGAGGAAGATCGGATCGAGGTGGGAAATATGACAAC
TCTGCTGGAAGCGGTCTCCGCAAGCCAAAGTGGGATTGTGAAAAGTTAACTCCGTTTCAA
AAAGAATTTTATCAAGAACATCCAAGTACTGCAGGAAGACCAGTCCATCATGTTCAAGAA
TATTATCAGAAGCATGAGGTTACAGTTACTGGGTCAAACTTAAAGAAACCTGTGCTTTTC
TTTCATGAGGCAAGTTTTCCAGATTACATTAATAATCAGTTGCTGTCCAATGGATTTAAG
GCACCAACTCCTATACAAGCAATTGGTTGGCCACATGCACTTGGCGGTCAAGATCTTGTT
GGGATTGCTCAAACTGGATCTGGTAAAACACTCTCATTTATTTTGCCAGCTATGATTCAC
ATTAATGCTCAGCCATATCTTGAAAGAGGAGATGGTCCAATTGCTCTTGTACTTTGCCCT
ACAAGGGAGTTGGCACAACAAGTTCAAGCAGTTGCAAATGATTATGGGCAGCTTTGCCAC
ATTAGGAATACCTGTGTATATGGTGGGGCATCAAAAGCCCCTCAAATTAGAGATTTGGAG
AGAGGTTGTGAAATCGTGATCGCTACACCAGGTCGCCTTATTGATTTTCTAGAAGCCCGC
AAGACAAACCTTCGCAGATGTACTTACTTGGTTCTTGATGAAGCTGACAGAATGTTGGAC
ATGGGTTTTGAACCACAAATACGAAAAATTATTGATCAGATTCGTCCAGACAGACAAACA
CTGATGTGGAGTGCAACATGGCCAAAGGAAGTTCAAAAGCTCGCAAATGATTTTCTCAGA
GATAATGTTCATATCCAAATTGGATCTGTGAATATTTCTGCGAATCACAATATTCTACAA
ATCGTTGATGTTTGTACAGAAGATGAAAAATCCGAAAAGCTAATGAGATTGATGGAAGAA
ATAATGGGAGAGGCAGAGAATAAGACAATCATATTCACAGAAACTAAGAGAAAATGTGAT
ATTCTCACTCGCAACATGAGGCGTGATGGTTGGCCTGCCATGTGTATTCATGGTGACAAA
TCCCAACCAGAGAGAGATTGGGTTTTAAATGAGTTTCGAACAGGAAAGTCTCCAATTCTG
GTTGCAACAGACGTGGCATCACGTGGTCTTGATGTTTCAGATATCAAATTTGTCATAAAT
TTTGATTTTCCAAATCAATGTGAAGATTACATTCATCGAATTGGGCGAACAGCAAGAGCG
AATCAAACTGGAACTGCATACACATTTTTCACACAAGCCAATGCTAAGCAGTGCAAAGAT
TTAATTGAAATCCTTAAGGAGGCAAAGCAGCAAATTAACCCAAGGTTGATGGAGTTGGCT
CAATCATCATGGGGAAATTTCGGTAAGAATCGCAGAGGTGGTGGCAGTAGTCGTGGAGGT
TATGGTTACGGAGGAGGCAGAAGCAATGGTTTTGGTGGAGCTGGTGGACAACGTAGTAGT
GGTGGCTACAACAACAGTGGTGCCTATGGTGGAAAACCAGCTGGTGCATATGGGGGACAG
CAAACAAATGGTTACGCAAAACCACAACAAAATTTTGGTAACATGGCAGGTACACAGTTT
ATGATGATGCCAGGAGGTCCAGTCCCAATGTAAAAGAAACATTCCTAACAATGTATTTTA
ATCCACTAGTTTGTAATGCTTGTGTAAAGTTGAGCACAATCATACTTGGAAGAAAGGCTA
TTCTCTTCGTTTGCGCTGTAATATTTTCCAGTTACTACTACATAATACAGTCTGCTGCTT
TAACCGAAACCAAGCTTGGTTGTTGGTATGTAGCTTCAGCTTGTATATACCATGTTATTA
GACCACTTTTGTTCTTGATTTTAGCATTATTTATCAACCACGAATTTAGGCCAATTTTCT
TTATTACTAAGTTATCTAACCGAACTTGCTGATTTTAGGCGTTATGCCAGTGAGCTCGTA
GCGTACCATGTAAAATAAATTCTTTCAAAACAA
ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[119-147] 9.737 |
SMART |
Helicase_ATP-bd (IPR014001) - T[138-341] 1.5E-64 |
Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[143-314] 6.2E-48 |
ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[150-325] 32.031 |
SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[191-479] 5.81E-76 |
ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[271-279] . |
CDD |
Helicase_C (IPR001650) - T[337-469] 1.99347E-42 |
ProSiteProfiles |
Helicase_C (IPR001650) - T[353-500] 25.029 |
Pfam |
Helicase_C (IPR001650) - T[353-461] 1.1E-29 |
SMART |
Helicase_C (IPR001650) - T[380-461] 1.9E-32 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
DDX17_HUMAN | 62.715 % | 667 | 0 |
DDX5_HUMAN | 58.033 % | 669 | 0 |
DDX42_HUMAN | 41.63 % | 358 | 6.46E-113 |