- Transcript 'KH2012:KH.C9.680.v1....' >
- Region 'REG00000778' >
- Transcript 'KH2012:KH.C14.414.v2...' >
- Transcript 'Cisavi.CG.ENS81.R51....' >
- Transcript 'KH2012:KH.C2.471.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.471.v2.A.nonSL6-1
Possible name(s)
DDX17; DDX42; DDX5
Gene model
Location
KhC2 [80,477 / 82,627]
>KH.C2.471.v2.A.nonSL6-1
SIYIILTVTRMPGYGSRDRGGDRGYGSYGGGRSNGSYGGGNDRWGGRGGGGGGRGRSDRG
GKYDNSAGSGLRKPKWDCEKLTPFQKEFYQEHPSTAGRPVHHVQEYYQKHEVTVTGSNLK
KPVLFFHEASFPDYINNQLLSNGFKAPTPIQAIGWPHALGGQDLVGIAQTGSGKTLSFIL
PAMIHINAQPYLERGDGPIALVLCPTRELAQQVQAVANDYGQLCHIRNTCVYGGASKAPQ
IRDLERGCEIVIATPGRLIDFLEARKTNLRRCTYLVLDEADRMLDMGFEPQIRKIIDQIR
PDRQTLMWSATWPKEVQKLANDFLRDNVHIQIGSVNISANHNILQIVDVCTEDEKSEKLM
RLMEEIMGEAENKTIIFTETKRKCDILTRNMRRDGWPAMCIHGDKSQPERDWVLNEFRTG
KSPILVATDVASRGLDVSDIKFVINFDFPNQCEDYIHRIGRTARANQTGTAYTFFTQANA
KQCKDLIEILKEAKQQINPRLMELAQSSWGNFGKNRRGGGSSRGGYGYGGGRSNGFGGAG
GQRSSGGYNNSGAYGGKPAGAYGGQQTNGYAKPQQNFGNMAGTQFMMMPGGPVPM
>KH2012:KH.C2.471.v2.A.nonSL6-1
TTTCAATTTACATTATACTTACTGTAACAAGAATGCCCGGTTATGGTTCAAGAGATCGTG
GAGGTGACCGTGGTTACGGCAGCTATGGAGGGGGACGTAGTAATGGCTCTTATGGAGGAG
GAAACGATCGCTGGGGAGGAAGGGGAGGTGGGGGAGGCGGAAGAGGAAGATCGGATCGAG
GTGGGAAATATGACAACTCTGCTGGAAGCGGTCTCCGCAAGCCAAAGTGGGATTGTGAAA
AGTTAACTCCGTTTCAAAAAGAATTTTATCAAGAACATCCAAGTACTGCAGGAAGACCAG
TCCATCATGTTCAAGAATATTATCAGAAGCATGAGGTTACAGTTACTGGGTCAAACTTAA
AGAAACCTGTGCTTTTCTTTCATGAGGCAAGTTTTCCAGATTACATTAATAATCAGTTGC
TGTCCAATGGATTTAAGGCACCAACTCCTATACAAGCAATTGGTTGGCCACATGCACTTG
GCGGTCAAGATCTTGTTGGGATTGCTCAAACTGGATCTGGTAAAACACTCTCATTTATTT
TGCCAGCTATGATTCACATTAATGCTCAGCCATATCTTGAAAGAGGAGATGGTCCAATTG
CTCTTGTACTTTGCCCTACAAGGGAGTTGGCACAACAAGTTCAAGCAGTTGCAAATGATT
ATGGGCAGCTTTGCCACATTAGGAATACCTGTGTATATGGTGGGGCATCAAAAGCCCCTC
AAATTAGAGATTTGGAGAGAGGTTGTGAAATCGTGATCGCTACACCAGGTCGCCTTATTG
ATTTTCTAGAAGCCCGCAAGACAAACCTTCGCAGATGTACTTACTTGGTTCTTGATGAAG
CTGACAGAATGTTGGACATGGGTTTTGAACCACAAATACGAAAAATTATTGATCAGATTC
GTCCAGACAGACAAACACTGATGTGGAGTGCAACATGGCCAAAGGAAGTTCAAAAGCTCG
CAAATGATTTTCTCAGAGATAATGTTCATATCCAAATTGGATCTGTGAATATTTCTGCGA
ATCACAATATTCTACAAATCGTTGATGTTTGTACAGAAGATGAAAAATCCGAAAAGCTAA
TGAGATTGATGGAAGAAATAATGGGAGAGGCAGAGAATAAGACAATCATATTCACAGAAA
CTAAGAGAAAATGTGATATTCTCACTCGCAACATGAGGCGTGATGGTTGGCCTGCCATGT
GTATTCATGGTGACAAATCCCAACCAGAGAGAGATTGGGTTTTAAATGAGTTTCGAACAG
GAAAGTCTCCAATTCTGGTTGCAACAGACGTGGCATCACGTGGTCTTGATGTTTCAGATA
TCAAATTTGTCATAAATTTTGATTTTCCAAATCAATGTGAAGATTACATTCATCGAATTG
GGCGAACAGCAAGAGCGAATCAAACTGGAACTGCATACACATTTTTCACACAAGCCAATG
CTAAGCAGTGCAAAGATTTAATTGAAATCCTTAAGGAGGCAAAGCAGCAAATTAACCCAA
GGTTGATGGAGTTGGCTCAATCATCATGGGGAAATTTCGGTAAGAATCGCAGAGGTGGTG
GCAGTAGTCGTGGAGGTTATGGTTACGGAGGAGGCAGAAGCAATGGTTTTGGTGGAGCTG
GTGGACAACGTAGTAGTGGTGGCTACAACAACAGTGGTGCCTATGGTGGAAAACCAGCTG
GTGCATATGGGGGACAGCAAACAAATGGTTACGCAAAACCACAACAAAATTTTGGTAACA
TGGCAGGTACACAGTTTATGATGATGCCAGGAGGTCCAGTCCCAATGTAAAAGAAACATT
CCTAACAATGTATTTTAATCCACTAGTTTGTAATGCTTGTGTAAAGTTGAGCACAATCAT
ACTTGGAAGAAAGGCTATTCTCTTCGTTTGCGCTGTAATATTTTCCAGTTACTACTACAT
AATACAGTCTGCTGCTTTAACCGAAACCAAGCTTGGTTGTTGGTATGTAGCTTCAGCTTG
TATATACCATGTTATTAGACCACTTTTGTTCTTGATTTTAGCATTATTTATCAACCACGA
ATTTAGGCCAATTTTCTTTATTACTAAGTTATCTAACCGAACTTGCTGATTTTAGGCGTT
ATGCCAGTGAGCTCGTAGCGTACCATGTAAAATAAATTCTTTCAAAACAA
ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[124-152] 9.737 |
SMART |
Helicase_ATP-bd (IPR014001) - T[143-346] 1.5E-64 |
Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[148-319] 6.3E-48 |
ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[155-330] 32.031 |
SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[196-484] 5.86E-76 |
ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[276-284] . |
CDD |
Helicase_C (IPR001650) - T[342-474] 3.6155E-42 |
ProSiteProfiles |
Helicase_C (IPR001650) - T[358-505] 25.029 |
Pfam |
Helicase_C (IPR001650) - T[358-466] 1.1E-29 |
SMART |
Helicase_C (IPR001650) - T[385-466] 1.9E-32 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
DDX17_HUMAN | 62.715 % | 667 | 0 |
DDX5_HUMAN | 57.869 % | 669 | 0 |
DDX42_HUMAN | 41.63 % | 358 | 9.08E-113 |