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TRANSCRIPT CARD

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  1. Clone 'ciad077d04' > 
  2. Clone 'csga011d10' > 
  3. Transcript 'KH2012:KH.C2.48.v2.A...'

Transcript Model

Transcript Id

KH2012:KH.C2.48.v2.A.SL2-1

Possible name(s)

KH.C2.48

Gene model

KH2012:KH.C2.48

Location

KhC2 [4,251,501 / 4,254,217]

Sequences

Amino acid sequence

Length: 316

>KH.C2.48.v2.A.SL2-1
KKTEKMGFVKLAAPGRTSRLFGLFIVLYLMLVATSTAGASARGHSGAPETQSFRSTVSNT
ETKSCFDIMKSCRHHKECREALVKLKTKCAVKAGSCNTNMRNLPTCAKIMDLLTNARFFN
PDQKCSCNKKRGHCAAIHKKIYENPCFGSVRFLRSRNMLPKLDDIEKPNTVQSNLAAVSR
ESSDEVFEAFMTYNDYAADESVQLMTSPTPGTSQSESTTVVSVSGDVKNDESNDVIIPQT
ESGSINYVATKSETYVEDPFDQPTNTLPHNDAVLLHVVAIATGILLIVMVIAGAAMLFFV
SMKRKECKNARKETMT

Nucleotide sequence

Length: 1,333

>KH2012:KH.C2.48.v2.A.SL2-1
CTGTCTGTAGCCAAACCGCCAGACTAGGAATTTGAGACGAAACGACTACCACTGTGACGA
ATAAGTTAAAAAAAGACAGAGAAGATGGGTTTTGTAAAACTAGCAGCGCCAGGAAGAACA
AGCAGACTTTTTGGACTTTTTATCGTTCTTTATTTGATGCTGGTAGCGACATCCACTGCA
GGAGCATCCGCAAGAGGGCATAGTGGAGCTCCGGAAACGCAAAGCTTCCGCTCGACAGTG
AGCAACACTGAAACGAAATCCTGCTTCGATATTATGAAGTCCTGCCGCCACCATAAAGAA
TGCAGAGAAGCACTCGTGAAACTAAAAACTAAATGCGCGGTGAAAGCGGGCAGCTGCAAC
ACAAACATGCGTAATTTACCAACATGCGCCAAAATCATGGATTTGCTAACTAATGCTCGA
TTCTTCAACCCTGATCAGAAGTGCTCGTGTAATAAGAAACGAGGTCACTGCGCTGCCATA
CACAAGAAAATCTACGAGAACCCTTGTTTCGGTTCCGTGCGATTTCTTCGATCCAGGAAC
ATGTTGCCTAAACTCGACGATATTGAAAAACCGAATACTGTCCAATCAAACCTAGCAGCA
GTGTCACGTGAATCAAGCGATGAGGTATTCGAGGCCTTTATGACGTACAATGACTACGCC
GCTGACGAAAGCGTCCAGTTGATGACGTCGCCAACTCCGGGAACGTCACAGTCCGAATCC
ACAACCGTCGTGTCCGTTTCCGGTGACGTCAAGAACGACGAAAGCAATGACGTCATAATC
CCACAGACCGAAAGCGGGAGCATCAATTATGTCGCAACAAAGAGCGAGACTTACGTGGAA
GATCCGTTCGACCAACCAACCAACACCCTACCACACAATGATGCTGTGCTGTTACATGTG
GTGGCGATCGCGACCGGCATTCTACTGATAGTAATGGTGATAGCAGGAGCTGCGATGCTT
TTCTTTGTAAGCATGAAGAGAAAGGAATGCAAAAACGCGAGAAAGGAAACGATGACGTGA
CGATGACGTCAACATCTGTGATCATTTCCTTATAAATGTTGTTGACAGCGTCACCGCATA
CGTCACGTTACCTAGCGCCAAGCGTGACAATCGAAGATCTTTTCACATCACTGTTTGTTC
ATGCGGCTCGTAATTATGACGTCATAATTTGAATCCGGCGCCGTTCGACCGTTCGTTTAT
TTTCGTTTTCTTGTTGTTGCCCGAACTCGGCCTATTATTTTTTTACCTGAGATTTTATTT
ATTTTCTGTTTTCTTATATCGCTCCCATGTTCGAACCGATGTTTTTATCGCCATTAAATC
ATTTCAAAAATTA

InterProScan

SUPERFAMILY
GDNF_alpha (IPR037193) - T[63-149] 3.27E-6
Pfam
GDNF/GAS1 (IPR016017) - T[65-146] 7.6E-9
SMART
GDNF/GAS1 (IPR016017) - T[65-146] 8.3E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value