Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.565.v1.A.SL1-1

Possible name(s)

SPCS3

Gene model

KH2012:KH.C2.565

Location

KhC2 [5,534,192 / 5,536,797]

Sequences

Amino acid sequence

Length: 180

>KH.C2.565.v1.A.SL1-1
IIVMNTFLSRLNTLFAFSISVVAAVTFACFLTTHFLDYTQDVEIEVKKAIVKNMEEFYVG
EKHDLGHIRFSLKANMTPVFNWNCKELFLYLMAEYETPRNKINQVVLWDKIINRGENAVL
DLKKVHAKYYFFDDGSDLRGKNITLSLHWNVIPNAGYLWRVKGRQDLGYTLPDSYAGSRV

Nucleotide sequence

Length: 829

>KH2012:KH.C2.565.v1.A.SL1-1
AAATTATAGTCATGAATACATTTCTTTCGCGTTTAAACACGCTCTTTGCGTTCAGTATAA
GCGTTGTGGCCGCAGTGACATTTGCTTGTTTTTTGACGACTCATTTTCTGGATTACACAC
AAGATGTTGAAATAGAAGTCAAAAAAGCAATTGTAAAAAATATGGAAGAATTCTATGTTG
GAGAGAAGCATGATCTTGGTCACATTCGATTTTCCCTCAAAGCCAACATGACTCCAGTTT
TTAACTGGAACTGCAAAGAACTTTTTCTCTATTTGATGGCTGAATATGAGACACCACGTA
ACAAAATTAACCAAGTTGTGTTGTGGGACAAAATCATTAACCGTGGAGAAAATGCAGTGC
TTGATCTAAAAAAAGTTCATGCTAAATATTATTTCTTTGATGATGGTTCTGATTTAAGAG
GAAAAAATATTACCCTCTCTTTGCACTGGAATGTCATTCCTAATGCTGGATACTTGTGGC
GTGTGAAGGGCAGACAAGATCTTGGGTACACACTTCCTGACAGCTATGCTGGTTCTAGAG
TATAATATAGTCGTTTTTATCTGTGTACTGTTATTGGGAATTTGCGTTTTACAGATACAT
ATCATGCTGTATTGCTATGTGTATCTTGAGCCTAAACATAAAATTGTTCTTTATGTGTCT
TCTGTCTTGGTTTGCGACAATTTTTTTGTGCAATACTATGAAATTTGAATCCAACCAAAC
AAAATGTCTTACTAAAGAGAAAAGTGCATTGTTTGTATTTTTTATTTCATTATTGGTGTG
TGGATTTTGTGTTTAAAAGATGGATAGGAAATAAACGTTGTTTAATACA

InterProScan

PANTHER	SPC3 (IPR007653) - T[4-177] 2.4E-61
PIRSF	SPC3 (IPR007653) - T[4-179] 7.7E-46
Pfam	SPC3 (IPR007653) - T[7-173] 1.3E-57

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SPCS3_HUMAN	52.874 %	187	3.41E-61