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TRANSCRIPT CARD

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  1. EST 'AV888345' > 
  2. Transcript 'KH2012:KH.C11.210.v1...' > 
  3. Transcript 'KH2012:KH.C14.413.v2...' > 
  4. Transcript 'KH2012:KH.C2.57.v2.A...'

Transcript Model

Transcript Id

KH2012:KH.C2.57.v2.A.SL2-1

Possible name(s)

YTHDF1; YTHDF2; YTHDF3

Gene model

KH2012:KH.C2.57

Location

KhC2 [154,242 / 157,256]

Sequences

Amino acid sequence

Length: 632

>KH.C2.57.v2.A.SL2-1
CRHIKLLYVFKFFLHVQHHKTQTGRSRMQNGLESKGQTGRNDEFDSSYMHQANVNPAYGM
APTSDSYMPSYYGQMPFPYMGSSEWSTGSTDNMPYLSGFGGEAQQHSFLPDAMFSHPPAA
LGNTPAYYNQPYNFFQHGTDFSPWASHSSAHGTGMPETPGGTGFGQQTAAPTYNGDYYPS
IMPATPHDYLGTGEAIVSNGSVLGHGAPGAAIPGVGGSTVMSSGDPIGKLPVGSSSNSMK
MVEQGIQNMGLGMSSMSGDPMKQMQVTPVIPMPGGGSIVSAGAPQNATNISGQSSQSASS
SNNSTPVPGSNAPKPVSWAAIASKPAKPQPKPKAKSMVGPGLPPPIKHNMDIGTWDSQTP
AKGPAKGQMPGQPGAPQRWSAPRQGPADGSVSSNHHSANAGNTNTNFHYNNAQTKEESGN
EVLEKLKAENDYNPKRLTIDVRNARFFVIKSYSEDDIHRSIKYNIWCSTDHGNKRLDAAF
REQQGHGPVILLYSVNGSGHFCGVAEMLTQIDYSKRAGVWAQDKWKGKFQVKWIYAKDVP
NSQLRHIRLENNENKPVTNSRDTQEVPAEKGRQVLKIISSYKHQTSIFDDFSHYERRQVE
EEGLRQKRNELRSRDNHKEKQSAHPDQASPKN

Nucleotide sequence

Length: 2,607

>KH2012:KH.C2.57.v2.A.SL2-1
TGTAGGCATATAAAGTTGTTGTATGTATTTAAATTTTTTCTGCATGTACAGCATCATAAA
ACTCAAACTGGTCGAAGCAGAATGCAGAATGGTTTAGAAAGTAAAGGTCAGACTGGAAGG
AATGATGAGTTTGATTCAAGTTATATGCATCAAGCTAATGTGAATCCGGCTTATGGCATG
GCACCAACCAGCGACTCCTACATGCCAAGTTATTATGGCCAGATGCCGTTTCCTTACATG
GGAAGTTCAGAGTGGTCAACAGGGAGTACAGATAACATGCCGTATTTATCTGGATTTGGT
GGGGAAGCTCAACAACACAGCTTTCTACCTGATGCCATGTTCAGTCACCCTCCAGCTGCA
CTTGGAAATACACCAGCGTATTACAACCAACCGTATAATTTTTTTCAACATGGAACTGAC
TTTAGTCCGTGGGCATCACATAGCTCGGCACATGGGACTGGAATGCCAGAAACTCCTGGT
GGAACTGGCTTCGGCCAGCAAACTGCTGCACCAACTTATAATGGTGATTATTATCCATCA
ATTATGCCGGCAACTCCGCATGATTATTTAGGTACTGGTGAAGCTATAGTTTCCAATGGT
AGTGTCTTGGGTCATGGTGCCCCAGGTGCTGCGATACCAGGTGTTGGTGGAAGTACTGTC
ATGTCAAGTGGTGACCCTATTGGTAAACTACCCGTTGGTTCTTCATCAAATAGCATGAAG
ATGGTTGAACAGGGTATACAGAATATGGGACTTGGTATGTCTTCAATGTCTGGCGATCCT
ATGAAGCAAATGCAAGTAACTCCTGTCATTCCCATGCCTGGTGGGGGATCTATTGTGTCA
GCAGGTGCACCACAAAATGCAACCAACATTAGTGGACAATCAAGCCAAAGCGCCAGTTCA
AGTAACAATAGCACACCAGTGCCTGGTTCCAATGCACCAAAGCCAGTATCATGGGCAGCT
ATTGCATCAAAACCTGCAAAACCGCAACCTAAACCGAAAGCTAAATCGATGGTTGGGCCA
GGACTACCACCACCTATTAAGCATAACATGGATATTGGAACTTGGGACTCTCAGACTCCA
GCTAAAGGACCAGCGAAAGGTCAAATGCCAGGTCAACCAGGTGCCCCGCAGAGATGGTCG
GCTCCACGGCAGGGACCTGCAGATGGTTCAGTTTCATCGAATCACCATTCTGCAAATGCT
GGAAACACAAACACTAATTTCCACTACAACAATGCACAAACTAAAGAAGAATCAGGAAAT
GAGGTGTTGGAAAAATTAAAAGCTGAAAATGACTACAACCCAAAACGGTTGACCATCGAC
GTTCGGAATGCAAGATTTTTTGTAATTAAATCGTATTCTGAAGATGATATTCATCGTTCT
ATCAAATACAACATTTGGTGCTCCACTGACCATGGCAACAAACGATTGGATGCAGCGTTT
CGTGAACAGCAAGGACATGGCCCGGTTATTTTACTCTACTCTGTAAACGGTTCTGGTCAT
TTCTGTGGCGTTGCAGAAATGCTCACTCAGATTGACTACAGCAAGCGTGCTGGTGTTTGG
GCTCAGGATAAGTGGAAAGGAAAGTTTCAGGTGAAATGGATTTATGCGAAGGACGTTCCT
AACAGCCAGCTTCGTCATATTCGTCTTGAAAATAATGAGAATAAACCGGTGACAAACTCA
CGTGACACTCAGGAGGTTCCTGCAGAGAAAGGAAGACAAGTTCTTAAAATCATTAGTAGC
TATAAACATCAAACAAGTATATTTGATGACTTTTCACATTACGAACGCCGTCAAGTGGAA
GAAGAAGGTCTTCGTCAAAAACGTAATGAACTGAGATCTCGGGACAATCACAAAGAAAAA
CAATCAGCTCATCCAGACCAAGCGTCGCCAAAAAATTAATCAATTAGTTTTGTTAGTATG
CCTAATTTAGTTTGTCACCACTGCTTAGCTGGAAACTTAATTTGTTTGTATAATATGAAG
TGATTGTATTCTTTATTTCATTATGGCGTCTCGGTTTGGGCTGTTGTTGTGGAAATTTCA
AACGTTGTGGTGGAAAATGTAAATTCTTTGCATGGTCATTTTACCTTAAAAAGAACACAA
TTATTGGTTAGTAGGGACTAAGGGTTACTAACTATGCGATGCCAGACCGTCCTACTACAA
ATATAAAATAATAAGAATGAACCACACCACAGATAATCATGATCATTTGTGCCTCATAAC
AAAGTTATTCAGTGCCACCACAATAATACCATCATTCGTAATCCATGCATAGTAGCGTAA
GATCTCATTAGTTTGAATATTCGTTGTAAAATATTTATTGTTTTCTTGGTATCTGTAATA
ATGATGAGTGTCAAATCCTTGTTCCAACATACAAGGCAATCACTTGACCTTCATCTTCAT
TGAAAATTATTGGAACTATGCTAATAATTATGTAATGAAGTTACTTGCAAATTATTATGT
AAATATAATCTTGGGCTTCGTTATCATCACAGCACGATGTGTGCAACCGCTGAAGTTTTC
AGTGTTTTATTTCGTAGGTTGTTCTGTTCGTGTGTATTGGTTCCACTAAATTTCTATCGT
ATAACGAAATTAACATAATATAAATTC

InterProScan

ProSiteProfiles
YTH_domain (IPR007275) - T[444-578] 48.514
Pfam
YTH_domain (IPR007275) - T[444-578] 1.4E-43

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
YTHD1_HUMAN 42.811 % 402 2.13E-133
YTHD2_HUMAN 42.813 % 419 6.16E-140
YTHD3_HUMAN 63.927 % 300 5.87E-94