Aniseed - Transcript Card

Transcript 'KH2012:KH.C2.596.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.596.v1.A.SL1-1

Possible name(s)

PCTP; STARD10; STARD7

Gene model

KH2012:KH.C2.596

Location

KhC2 [3,501,241 / 3,509,040]

Sequences

Amino acid sequence

Length: 283

>KH.C2.596.v1.A.SL1-1
CFYQFFAMNDEDVVYPADDQSFKDFKSMVEEEVGWEICYNKKNVCVSTRNQANSNVKLLK
AVTSFSDVSAATLFDVVHDTEYRRKWDHDMIEMKEICKLCVNNTVSYYAVKCPTPVKSRD
VLFLCSWIAYPSMRDPKEYLMINKSVSHSDYPPRNNMVRAISLVTGYLIRPTGPNSAEFL
YLTHFDPRGSLPKWVVNKVAEFFTPKVIHRIHKAAKKYGAWKNKHSANFKPWLWPEQCRL
PTAKPGKLSARVEKVEIIDETALSEDSAANGRDPEEISDDEDV

Nucleotide sequence

Length: 1,652

>KH2012:KH.C2.596.v1.A.SL1-1
CATTTTTGCTTGGTTGGAATCACTTCTAAGTTTATTAGTGTTTTTACCAATTTTTCGCAA
TGAATGATGAAGATGTTGTCTACCCTGCTGACGATCAAAGTTTTAAAGATTTTAAATCAA
TGGTAGAAGAAGAGGTGGGATGGGAGATCTGCTACAATAAGAAGAATGTCTGTGTCTCGA
CGAGGAACCAGGCAAATTCAAATGTTAAGCTCCTAAAGGCAGTGACGTCATTTAGCGATG
TGTCAGCTGCCACATTATTTGATGTTGTACATGACACTGAATACAGGAGAAAATGGGACC
ATGATATGATAGAAATGAAGGAAATATGCAAACTGTGTGTTAATAACACAGTCTCATACT
ATGCAGTAAAATGTCCCACCCCAGTGAAGTCCAGAGATGTATTATTCCTATGTTCGTGGA
TTGCCTACCCCAGCATGAGGGACCCAAAAGAATATTTAATGATCAACAAATCTGTTTCAC
ACAGCGACTACCCACCCAGAAATAATATGGTGAGAGCAATCTCATTGGTTACTGGATATT
TAATTCGACCCACTGGACCAAATTCTGCTGAGTTTTTATACTTAACTCATTTTGACCCGC
GAGGTTCTCTTCCTAAGTGGGTGGTGAACAAGGTGGCTGAGTTTTTTACTCCAAAGGTAA
TCCATCGTATCCACAAAGCTGCGAAGAAATACGGAGCTTGGAAGAACAAGCACAGCGCCA
ACTTCAAGCCATGGTTGTGGCCGGAACAGTGTCGGCTTCCAACCGCTAAGCCTGGAAAAT
TATCCGCGAGGGTTGAAAAAGTTGAAATTATTGACGAAACTGCTCTTTCTGAGGACAGCG
CCGCTAACGGACGTGACCCTGAAGAGATTAGCGACGACGAGGATGTGTGACCTTTTCAAC
TTTGACCTCGTGGACCCTCGTGCCTTCTCTTTAGGCAACTACCCACTTAATATTCAACGT
TTCATTCTCGTCTGTTGGTTACTTTAAAAAATATTCAATTATCCCACTTTTAAAATTTCA
AAAAAAAATTTTTATGTGTGCAATAGCCGAGAGAGCCCGCGTTCTTTCGGCTCGGATTTT
ATACACGCGTTTGCAATGGTTTCGGTACGTTTAGTCTGTGTTCCTCTTTTTCTGTTAAAA
CTAACTTGTATACAAAGAATTGACCAGTCTATTATAACCGCACATGTTTAAAGAACGTTA
TTTCCGTGAATAATCTTTATATTGTTGTCACCTCGTAGCAGTTCCTAGATTTTAGAATCA
TTTTATAAAATCTCACGTTTCATTTGCTTGTGTGACCCTCCGAATATCTCTTATACCTTG
TAGTTTACTTTGCTGTAGTTTTTTCTGGTACATTCGAGCGCTGTACAATCATCGTTCATA
GCGACCCTGCACATTTCTTCATTTGTACAAACTACCAACCAACACAACCGAACTGGCACA
ATTTTTGCTTTTATTTTTTGCATCCGAATATATGTGTCCCAATTTTTGGTGGTGGTGCTT
CTGACGATCAGAACTTAATTTTTGTTTCATTATTACCGTGTCATATTCCACATGCTCTTT
GCACGCGTTTTACGTTACCCGTAAAGTAAGGTTTGATACATAATGCAGTGGCGCCACCTA
GCGGTGTTCCAAATAAATTATTTTCAATTGCA

InterProScan

SMART	START_lipid-bd_dom (IPR002913) - T[12-221] 4.8E-13
Gene3D	START-like_dom_sf (IPR023393) - T[16-220] 2.6E-53
Pfam	START_lipid-bd_dom (IPR002913) - T[26-215] 9.0E-31
ProSiteProfiles	START_lipid-bd_dom (IPR002913) - T[31-220] 32.959

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
STA10_HUMAN	44.043 %	233	5.25E-76