Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.602.v1.A.ND1-1

Possible name(s)

FAXDC2; MSMO1; SC5D

Gene model

KH2012:KH.C2.602

Location

KhC2 [5,278,320 / 5,280,115]

Sequences

Amino acid sequence

Length: 237

>KH.C2.602.v1.A.ND1-1
TVVLTMDYINQATAYLNLQWSSVLHLFGNEKKNVFVIGTSLVLFLSFCAVNSFFMFLDFT
GKPKFLHKYKIQKDKNIPVEPARFLHCCKVAFRNELLSCGMVLFLYPVMQCTGMTCQAPL
PPIWEGFLHFVAFVLVDEFIFYYSHRLFHHPFIYKHIHKMHHEWIAPISIAASYAHPIEH
IVSNALPLLVGPILMGSHIAVVWIWLVIAQFETCLHHCNYHFPVMSSPQFHDYHHVK

Nucleotide sequence

Length: 1,337

>KH2012:KH.C2.602.v1.A.ND1-1
GCATGTAGCAGCTCTGGTGGTTCTATTTTTATTTTTAATAACAATTGATTTGAGTTGAAC
AGTTGTTTTAACAATGGATTACATTAATCAAGCAACTGCGTATTTGAACCTACAGTGGTC
CAGCGTATTACATTTGTTTGGCAATGAGAAAAAGAATGTATTCGTTATTGGAACGTCGCT
GGTGCTCTTTCTTTCGTTCTGTGCCGTTAACTCGTTTTTCATGTTCCTTGATTTTACCGG
AAAACCAAAATTTCTGCACAAATACAAAATACAGAAAGACAAGAATATACCGGTCGAGCC
CGCAAGATTTCTTCACTGTTGCAAAGTGGCGTTCAGAAATGAACTCCTGTCGTGCGGTAT
GGTACTGTTTCTATACCCTGTGATGCAATGCACGGGCATGACTTGTCAGGCACCACTGCC
TCCAATATGGGAAGGTTTCCTGCATTTCGTTGCGTTTGTGTTGGTTGACGAGTTTATATT
TTATTACTCGCACAGGTTATTTCATCATCCATTTATATACAAGCACATTCACAAGATGCA
CCATGAATGGATCGCACCCATCAGTATTGCTGCTTCGTACGCTCATCCAATAGAACATAT
CGTGTCAAATGCTCTTCCGCTTCTGGTCGGGCCTATTCTTATGGGTTCTCACATAGCAGT
AGTGTGGATATGGTTGGTCATTGCTCAGTTCGAAACGTGCCTTCATCACTGTAATTATCA
CTTCCCTGTCATGTCGTCTCCACAATTTCACGATTATCATCACGTCAAGTAAGCGAAAAG
CGGATAAGTTTAGAGGTTATCGAATCTATACCTCTATCTATATAGCGTAGAAGTCATGGA
CTTTCGGCCCGACGCTGTTACCATTAAAGGCGTGTGTTTGGGCAAGACGTTTACCGGCAA
CTGCTACAACCGTGTAATCCAGCAATAAAAAAAAATTCCCACAAACCTTAATGTGGCAGC
TCGTTTACGGGTACGAGGTGTATGAAAAAGACCAACCTTGTATAATGTCTCTCGTCGCCC
CGCCATGCGAGGATGAAAAAATTATTTTCATTCATTAATTCAGGTTTAACGAGTGCTTTG
GGACAAATGGTCTTCTAGATTGGGTTCACAAAACAGACGTTCAGTTTAAAAAATCCATCC
AAGCAAAGAGACACATTACTTATTATCGGTTTGGACCAATCACCAAACTCTTTCCCAGCA
AAGATAAAAAAGAGAATTAGGTGGTTTTAGTTTTTCATGGCTTATTAATTTCGGTGTCTT
GATTTAATTTCGCTTGATTGATATTCTTTGCAAGCTGGTACAATTGTTATACAAATAGTA
TAAATAAATACAAAGCT

InterProScan

Pfam	Fatty_acid_hydroxylase (IPR006694) - T[130-236] 6.6E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FXDC2_HUMAN	43.86 %	202	4.31E-64
MSMO1_HUMAN	31.019 %	84.3	2.52E-19