- Transcript 'KH2012:KH.L31.3.v2.A...' >
- Transcript 'KH2012:KH.C2.618.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.618.v1.A.nonSL7-1
Possible name(s)
GSPT1; GSPT2; HBS1L
Gene model
Location
KhC2 [1,570,014 / 1,572,952]
Amino acid sequence
Length: 458
>KH.C2.618.v1.A.nonSL7-1
DVKDEVMNEEVEEVEKVDVKEVEEPPLSPSLINKEEHVNVVFIGHVDAGKSTIGGQIMYL
TGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETESKHFTIL
DAPGHRSFVPNMIGGASQADVAVLVISARRGEFETGFERGGQTREHAMLAKTAGVHHLIV
LINKMDDSTVKWSQERYDECKEKLTPFLKKVGFNPKKDIHFMPCSGLTGANLKESDYANH
PWYTGLPLIPYLDNLPTVSRSGAGPLRLPIVDKYKDMGVIVLGKVESGRLYKGQQLVLQP
NKRKLKVLGIQSDEVDTESAIAGENVKVRVDSIEEDEISKGFVLCSPDDLCSTGTLFDAQ
IAIIEYKSIICAGYSAILHIHTCIEEVVIKQLICLLDRKTGEKKKTRFVKQDQTVIARLQ
TQGPVCIESFKNFPQMGRFTLRDEGRTIAIGKVLKVLE
Nucleotide sequence
Length: 2,356
>KH2012:KH.C2.618.v1.A.nonSL7-1
GATGTAAAGGATGAAGTGATGAATGAAGAGGTGGAGGAAGTTGAGAAAGTTGATGTGAAA
GAGGTTGAGGAACCACCTTTGTCACCATCCCTAATTAACAAAGAAGAACATGTGAATGTT
GTTTTCATCGGCCATGTTGATGCTGGAAAATCCACAATTGGAGGACAAATTATGTATCTT
ACTGGAATGGTTGACAAACGTACTCTGGAAAAATACGAAAGGGAAGCCAAGGAAAAAAAC
CGAGAGACATGGTACTTGTCTTGGGCCTTGGATACAAACCAAGAGGAGAGAGATAAAGGA
AAAACAGTAGAAGTAGGGCGAGCTTATTTCGAGACTGAATCAAAACACTTTACCATTCTC
GATGCACCTGGCCATAGAAGCTTCGTACCTAATATGATAGGTGGGGCTTCACAAGCTGAT
GTAGCAGTGCTTGTTATCTCGGCACGTCGAGGAGAGTTTGAAACCGGGTTTGAGCGAGGA
GGACAAACACGGGAGCATGCTATGTTGGCAAAAACAGCAGGTGTTCACCATCTAATCGTG
CTTATTAATAAAATGGATGATTCAACTGTTAAGTGGAGTCAGGAACGATATGATGAGTGT
AAGGAAAAGCTCACGCCTTTTTTGAAGAAAGTTGGCTTTAATCCCAAAAAAGACATTCAC
TTCATGCCCTGCTCTGGACTCACAGGAGCAAATCTGAAGGAGTCTGACTATGCTAACCAT
CCATGGTATACTGGACTCCCCCTCATTCCTTATTTAGACAATCTTCCCACGGTTTCCAGA
TCAGGTGCTGGGCCTCTCCGTCTTCCTATTGTCGACAAGTACAAGGACATGGGGGTGATT
GTGCTTGGCAAAGTGGAATCTGGTCGTTTGTATAAAGGACAACAGTTGGTATTGCAGCCA
AACAAGCGCAAGTTGAAAGTTCTTGGAATTCAATCTGATGAAGTTGATACAGAGTCCGCC
ATTGCTGGTGAGAACGTGAAAGTTCGGGTTGATTCAATTGAAGAAGATGAAATATCTAAG
GGTTTCGTCCTATGCTCACCTGATGATCTGTGCAGTACAGGAACATTATTTGATGCCCAA
ATTGCGATTATTGAATACAAATCCATCATCTGCGCTGGTTACAGTGCTATTCTACATATT
CATACCTGTATTGAAGAAGTAGTAATCAAACAACTCATTTGTCTTCTGGATCGAAAAACT
GGAGAAAAGAAAAAGACAAGATTTGTCAAACAGGACCAAACCGTAATTGCACGGCTGCAA
ACACAAGGTCCAGTTTGTATCGAGAGTTTCAAGAATTTCCCACAGATGGGTCGATTCACA
CTTCGGGACGAAGGACGCACCATTGCAATCGGGAAAGTGTTAAAAGTTCTTGAGTAAAAC
TGTAGAAATTTAAAGTTTTTATTTCACTTCAGCGATGCCATGGCTTGCATATTATTCATG
TTAGGCATCTATCGCTGGGTACAAGCGCAACTCTTACAATCAGTGTTGCACTGTTTCTGC
GACACAAGTGTAAATTTCCCTATTTCTACATTATCCTGATTGTAGACTACTTACTATGTG
TTGTTTGCCAAATCTTAAATGGTTTTAAGCGGGTACAAATCACAAACTAAAGTTTTCAGC
TGATCACCAAAGAAAAAGTTTATTGAGTGAATCAGATATTTATCTAAGCCAGTACCTTTC
AATGCATGCGGACAACACATGTTGTGCGGTTATTCTTTTATTTTCATCAATTAACTATGC
TTGTTAATTTCCCTTCACAACCTGCTGCTTGTCCAGATCACCATGAAATGTGGTCTAATA
CTTGTACATTTCACTTTCACAACCTCAAGGCTCCCCTTAGCTTACATGGAGTACAATATT
TTCATGCGCATACAGTTAAACCAGAGTTACTTTTACAACCACATAGGTATTTATTCGTTG
TACAAATTTGTTGCACCAACCACAGGTGGCGATGTTTCTGTTGCATAGTTCTTCTTCTCC
ACTCGAAAAGCGAAAATTTGACTTGAAAAAATGATCTGCTTTAGTGCCTTTGTGTGCTTC
TCTTTATTTTTGCAGTGTCCAGTGTCACATGTGAAGACTTGGTTGTTGTGTTTTAAACAA
CGTTTCCCTACATACAGCCTAACAGTGGCAGTAAGCGTGAATTTTTTTCATGCAAATGCT
GTCGTATCCTATGCGTATCAAGTGCACAATTGAAATTGTATAGCACAGCTTGAAAAAGAT
TTTTTTGTGAATTAACAGAATTAAAAACCATGTTGTCTTAAATGTGGGCCAATGCTTGTT
GGTGGTGCTCTATCATATCGCTGTTTAAATTAATTTGGTCTTGGGCTCTTTGTTACAATA
AAGATTGAAGGAATAT
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[30-234] 4.28E-61 |
| ProSiteProfiles |
TF_GTP-bd_dom (IPR000795) - T[35-260] 54.696 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[36-233] 5.8E-46 |
| PRINTS |
TF_GTP-bd_dom (IPR000795) - T[39-52] 1.3E-16 - T[98-106] 1.3E-16 - T[118-128] 1.3E-16 - T[134-145] 1.3E-16 - T[178-187] 1.3E-16 |
| ProSitePatterns |
G_TR_CS (IPR031157) - T[91-106] . |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[261-350] 3.95E-21 |
| Pfam |
EFTu-like_2 (IPR004161) - T[278-345] 2.4E-7 |
| Pfam |
Transl_elong_EFTu/EF1A_C (IPR004160) - T[355-456] 4.4E-30 |
| SUPERFAMILY |
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[356-457] 7.2E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HBS1L_HUMAN | 43.091 % | 347 | 4.78E-113 |
| ERF3A_HUMAN | 78.231 % | 717 | 0 |
| ERF3B_HUMAN | 75.991 % | 710 | 0 |