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  1. Transcript 'KH2012:KH.C2.973.v1....'
  2. Clone 'cilv016p24'
  3. Transcript 'Phfumi.CG.MTP2014.S3...'
  4. Transcript 'KH2012:KH.C2.618.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.618.v1.A.nonSL8-1

Possible name(s)

GSPT1; GSPT2; HBS1L

Location

KhC2 [1,570,014 / 1,572,991]

Sequences

Amino acid sequence

Length: 471

>KH.C2.618.v1.A.nonSL8-1
PEQVESKEMEDDVDVKDEVMNEEVEEVEKVDVKEVEEPPLSPSLINKEEHVNVVFIGHVD
AGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGR
AYFETESKHFTILDAPGHRSFVPNMIGGASQADVAVLVISARRGEFETGFERGGQTREHA
MLAKTAGVHHLIVLINKMDDSTVKWSQERYDECKEKLTPFLKKVGFNPKKDIHFMPCSGL
TGANLKESDYANHPWYTGLPLIPYLDNLPTVSRSGAGPLRLPIVDKYKDMGVIVLGKVES
GRLYKGQQLVLQPNKRKLKVLGIQSDEVDTESAIAGENVKVRVDSIEEDEISKGFVLCSP
DDLCSTGTLFDAQIAIIEYKSIICAGYSAILHIHTCIEEVVIKQLICLLDRKTGEKKKTR
FVKQDQTVIARLQTQGPVCIESFKNFPQMGRFTLRDEGRTIAIGKVLKVLE

Nucleotide sequence

Length: 2,395

>KH2012:KH.C2.618.v1.A.nonSL8-1
CCTGAACAGGTTGAGAGTAAAGAGATGGAGGATGATGTCGATGTAAAGGATGAAGTGATG
AATGAAGAGGTGGAGGAAGTTGAGAAAGTTGATGTGAAAGAGGTTGAGGAACCACCTTTG
TCACCATCCCTAATTAACAAAGAAGAACATGTGAATGTTGTTTTCATCGGCCATGTTGAT
GCTGGAAAATCCACAATTGGAGGACAAATTATGTATCTTACTGGAATGGTTGACAAACGT
ACTCTGGAAAAATACGAAAGGGAAGCCAAGGAAAAAAACCGAGAGACATGGTACTTGTCT
TGGGCCTTGGATACAAACCAAGAGGAGAGAGATAAAGGAAAAACAGTAGAAGTAGGGCGA
GCTTATTTCGAGACTGAATCAAAACACTTTACCATTCTCGATGCACCTGGCCATAGAAGC
TTCGTACCTAATATGATAGGTGGGGCTTCACAAGCTGATGTAGCAGTGCTTGTTATCTCG
GCACGTCGAGGAGAGTTTGAAACCGGGTTTGAGCGAGGAGGACAAACACGGGAGCATGCT
ATGTTGGCAAAAACAGCAGGTGTTCACCATCTAATCGTGCTTATTAATAAAATGGATGAT
TCAACTGTTAAGTGGAGTCAGGAACGATATGATGAGTGTAAGGAAAAGCTCACGCCTTTT
TTGAAGAAAGTTGGCTTTAATCCCAAAAAAGACATTCACTTCATGCCCTGCTCTGGACTC
ACAGGAGCAAATCTGAAGGAGTCTGACTATGCTAACCATCCATGGTATACTGGACTCCCC
CTCATTCCTTATTTAGACAATCTTCCCACGGTTTCCAGATCAGGTGCTGGGCCTCTCCGT
CTTCCTATTGTCGACAAGTACAAGGACATGGGGGTGATTGTGCTTGGCAAAGTGGAATCT
GGTCGTTTGTATAAAGGACAACAGTTGGTATTGCAGCCAAACAAGCGCAAGTTGAAAGTT
CTTGGAATTCAATCTGATGAAGTTGATACAGAGTCCGCCATTGCTGGTGAGAACGTGAAA
GTTCGGGTTGATTCAATTGAAGAAGATGAAATATCTAAGGGTTTCGTCCTATGCTCACCT
GATGATCTGTGCAGTACAGGAACATTATTTGATGCCCAAATTGCGATTATTGAATACAAA
TCCATCATCTGCGCTGGTTACAGTGCTATTCTACATATTCATACCTGTATTGAAGAAGTA
GTAATCAAACAACTCATTTGTCTTCTGGATCGAAAAACTGGAGAAAAGAAAAAGACAAGA
TTTGTCAAACAGGACCAAACCGTAATTGCACGGCTGCAAACACAAGGTCCAGTTTGTATC
GAGAGTTTCAAGAATTTCCCACAGATGGGTCGATTCACACTTCGGGACGAAGGACGCACC
ATTGCAATCGGGAAAGTGTTAAAAGTTCTTGAGTAAAACTGTAGAAATTTAAAGTTTTTA
TTTCACTTCAGCGATGCCATGGCTTGCATATTATTCATGTTAGGCATCTATCGCTGGGTA
CAAGCGCAACTCTTACAATCAGTGTTGCACTGTTTCTGCGACACAAGTGTAAATTTCCCT
ATTTCTACATTATCCTGATTGTAGACTACTTACTATGTGTTGTTTGCCAAATCTTAAATG
GTTTTAAGCGGGTACAAATCACAAACTAAAGTTTTCAGCTGATCACCAAAGAAAAAGTTT
ATTGAGTGAATCAGATATTTATCTAAGCCAGTACCTTTCAATGCATGCGGACAACACATG
TTGTGCGGTTATTCTTTTATTTTCATCAATTAACTATGCTTGTTAATTTCCCTTCACAAC
CTGCTGCTTGTCCAGATCACCATGAAATGTGGTCTAATACTTGTACATTTCACTTTCACA
ACCTCAAGGCTCCCCTTAGCTTACATGGAGTACAATATTTTCATGCGCATACAGTTAAAC
CAGAGTTACTTTTACAACCACATAGGTATTTATTCGTTGTACAAATTTGTTGCACCAACC
ACAGGTGGCGATGTTTCTGTTGCATAGTTCTTCTTCTCCACTCGAAAAGCGAAAATTTGA
CTTGAAAAAATGATCTGCTTTAGTGCCTTTGTGTGCTTCTCTTTATTTTTGCAGTGTCCA
GTGTCACATGTGAAGACTTGGTTGTTGTGTTTTAAACAACGTTTCCCTACATACAGCCTA
ACAGTGGCAGTAAGCGTGAATTTTTTTCATGCAAATGCTGTCGTATCCTATGCGTATCAA
GTGCACAATTGAAATTGTATAGCACAGCTTGAAAAAGATTTTTTTGTGAATTAACAGAAT
TAAAAACCATGTTGTCTTAAATGTGGGCCAATGCTTGTTGGTGGTGCTCTATCATATCGC
TGTTTAAATTAATTTGGTCTTGGGCTCTTTGTTACAATAAAGATTGAAGGAATAT

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[43-247] 4.71E-61
ProSiteProfiles
TF_GTP-bd_dom (IPR000795) - T[48-273] 54.696
Pfam
TF_GTP-bd_dom (IPR000795) - T[49-246] 6.3E-46
PRINTS
TF_GTP-bd_dom (IPR000795) - T[52-65] 1.5E-16 - T[111-119] 1.5E-16 - T[131-141] 1.5E-16 - T[147-158] 1.5E-16 - T[191-200] 1.5E-16
ProSitePatterns
G_TR_CS (IPR031157) - T[104-119] .
SUPERFAMILY
Transl_B-barrel_sf (IPR009000) - T[274-363] 4.16E-21
Pfam
EFTu-like_2 (IPR004161) - T[291-358] 2.5E-7
Pfam
Transl_elong_EFTu/EF1A_C (IPR004160) - T[368-469] 4.6E-30
SUPERFAMILY
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[369-470] 7.4E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HBS1L_HUMAN 43.091 % 348 3.23E-113
ERF3A_HUMAN 78.231 % 717 0
ERF3B_HUMAN 75.991 % 710 0





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