- Transcript 'KH2012:KH.C2.618.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.618.v1.A.SL4-1
Possible name(s)
GSPT1; GSPT2; HBS1L
Gene model
Location
KhC2 [1,570,014 / 1,573,044]
Amino acid sequence
Length: 488
>KH.C2.618.v1.A.SL4-1
AVPEVVEMTIENSPNAVPEQVESKEMEDDVDVKDEVMNEEVEEVEKVDVKEVEEPPLSPS
LINKEEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWAL
DTNQEERDKGKTVEVGRAYFETESKHFTILDAPGHRSFVPNMIGGASQADVAVLVISARR
GEFETGFERGGQTREHAMLAKTAGVHHLIVLINKMDDSTVKWSQERYDECKEKLTPFLKK
VGFNPKKDIHFMPCSGLTGANLKESDYANHPWYTGLPLIPYLDNLPTVSRSGAGPLRLPI
VDKYKDMGVIVLGKVESGRLYKGQQLVLQPNKRKLKVLGIQSDEVDTESAIAGENVKVRV
DSIEEDEISKGFVLCSPDDLCSTGTLFDAQIAIIEYKSIICAGYSAILHIHTCIEEVVIK
QLICLLDRKTGEKKKTRFVKQDQTVIARLQTQGPVCIESFKNFPQMGRFTLRDEGRTIAI
GKVLKVLE
Nucleotide sequence
Length: 2,448
>KH2012:KH.C2.618.v1.A.SL4-1
TTGCTGTGCCAGAGGTTGTGGAGATGACGATTGAGAATTCTCCGAATGCCGTTCCTGAAC
AGGTTGAGAGTAAAGAGATGGAGGATGATGTCGATGTAAAGGATGAAGTGATGAATGAAG
AGGTGGAGGAAGTTGAGAAAGTTGATGTGAAAGAGGTTGAGGAACCACCTTTGTCACCAT
CCCTAATTAACAAAGAAGAACATGTGAATGTTGTTTTCATCGGCCATGTTGATGCTGGAA
AATCCACAATTGGAGGACAAATTATGTATCTTACTGGAATGGTTGACAAACGTACTCTGG
AAAAATACGAAAGGGAAGCCAAGGAAAAAAACCGAGAGACATGGTACTTGTCTTGGGCCT
TGGATACAAACCAAGAGGAGAGAGATAAAGGAAAAACAGTAGAAGTAGGGCGAGCTTATT
TCGAGACTGAATCAAAACACTTTACCATTCTCGATGCACCTGGCCATAGAAGCTTCGTAC
CTAATATGATAGGTGGGGCTTCACAAGCTGATGTAGCAGTGCTTGTTATCTCGGCACGTC
GAGGAGAGTTTGAAACCGGGTTTGAGCGAGGAGGACAAACACGGGAGCATGCTATGTTGG
CAAAAACAGCAGGTGTTCACCATCTAATCGTGCTTATTAATAAAATGGATGATTCAACTG
TTAAGTGGAGTCAGGAACGATATGATGAGTGTAAGGAAAAGCTCACGCCTTTTTTGAAGA
AAGTTGGCTTTAATCCCAAAAAAGACATTCACTTCATGCCCTGCTCTGGACTCACAGGAG
CAAATCTGAAGGAGTCTGACTATGCTAACCATCCATGGTATACTGGACTCCCCCTCATTC
CTTATTTAGACAATCTTCCCACGGTTTCCAGATCAGGTGCTGGGCCTCTCCGTCTTCCTA
TTGTCGACAAGTACAAGGACATGGGGGTGATTGTGCTTGGCAAAGTGGAATCTGGTCGTT
TGTATAAAGGACAACAGTTGGTATTGCAGCCAAACAAGCGCAAGTTGAAAGTTCTTGGAA
TTCAATCTGATGAAGTTGATACAGAGTCCGCCATTGCTGGTGAGAACGTGAAAGTTCGGG
TTGATTCAATTGAAGAAGATGAAATATCTAAGGGTTTCGTCCTATGCTCACCTGATGATC
TGTGCAGTACAGGAACATTATTTGATGCCCAAATTGCGATTATTGAATACAAATCCATCA
TCTGCGCTGGTTACAGTGCTATTCTACATATTCATACCTGTATTGAAGAAGTAGTAATCA
AACAACTCATTTGTCTTCTGGATCGAAAAACTGGAGAAAAGAAAAAGACAAGATTTGTCA
AACAGGACCAAACCGTAATTGCACGGCTGCAAACACAAGGTCCAGTTTGTATCGAGAGTT
TCAAGAATTTCCCACAGATGGGTCGATTCACACTTCGGGACGAAGGACGCACCATTGCAA
TCGGGAAAGTGTTAAAAGTTCTTGAGTAAAACTGTAGAAATTTAAAGTTTTTATTTCACT
TCAGCGATGCCATGGCTTGCATATTATTCATGTTAGGCATCTATCGCTGGGTACAAGCGC
AACTCTTACAATCAGTGTTGCACTGTTTCTGCGACACAAGTGTAAATTTCCCTATTTCTA
CATTATCCTGATTGTAGACTACTTACTATGTGTTGTTTGCCAAATCTTAAATGGTTTTAA
GCGGGTACAAATCACAAACTAAAGTTTTCAGCTGATCACCAAAGAAAAAGTTTATTGAGT
GAATCAGATATTTATCTAAGCCAGTACCTTTCAATGCATGCGGACAACACATGTTGTGCG
GTTATTCTTTTATTTTCATCAATTAACTATGCTTGTTAATTTCCCTTCACAACCTGCTGC
TTGTCCAGATCACCATGAAATGTGGTCTAATACTTGTACATTTCACTTTCACAACCTCAA
GGCTCCCCTTAGCTTACATGGAGTACAATATTTTCATGCGCATACAGTTAAACCAGAGTT
ACTTTTACAACCACATAGGTATTTATTCGTTGTACAAATTTGTTGCACCAACCACAGGTG
GCGATGTTTCTGTTGCATAGTTCTTCTTCTCCACTCGAAAAGCGAAAATTTGACTTGAAA
AAATGATCTGCTTTAGTGCCTTTGTGTGCTTCTCTTTATTTTTGCAGTGTCCAGTGTCAC
ATGTGAAGACTTGGTTGTTGTGTTTTAAACAACGTTTCCCTACATACAGCCTAACAGTGG
CAGTAAGCGTGAATTTTTTTCATGCAAATGCTGTCGTATCCTATGCGTATCAAGTGCACA
ATTGAAATTGTATAGCACAGCTTGAAAAAGATTTTTTTGTGAATTAACAGAATTAAAAAC
CATGTTGTCTTAAATGTGGGCCAATGCTTGTTGGTGGTGCTCTATCATATCGCTGTTTAA
ATTAATTTGGTCTTGGGCTCTTTGTTACAATAAAGATTGAAGGAATAT
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[60-264] 5.18E-61 |
| ProSiteProfiles |
TF_GTP-bd_dom (IPR000795) - T[65-290] 54.696 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[66-263] 6.9E-46 |
| PRINTS |
TF_GTP-bd_dom (IPR000795) - T[69-82] 1.7E-16 - T[128-136] 1.7E-16 - T[148-158] 1.7E-16 - T[164-175] 1.7E-16 - T[208-217] 1.7E-16 |
| ProSitePatterns |
G_TR_CS (IPR031157) - T[121-136] . |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[291-380] 4.37E-21 |
| Pfam |
EFTu-like_2 (IPR004161) - T[308-375] 2.6E-7 |
| Pfam |
Transl_elong_EFTu/EF1A_C (IPR004160) - T[385-486] 4.9E-30 |
| SUPERFAMILY |
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[386-487] 7.81E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HBS1L_HUMAN | 43.091 % | 348 | 5.07E-113 |
| ERF3A_HUMAN | 78.231 % | 718 | 0 |
| ERF3B_HUMAN | 75.991 % | 711 | 0 |