- Clone 'cima032d24' >
- Region 'REG00000041' >
- Clone 'ma121m08' >
- Transcript 'KH2012:KH.C2.618.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.618.v1.A.SL6-1
Possible name(s)
GSPT1; GSPT2; HBS1L
Gene model
Location
KhC2 [1,570,014 / 1,573,294]
Amino acid sequence
Length: 559
>KH.C2.618.v1.A.SL6-1
TEILNRKLIMNGQNIPDAWDDGAANGTDGVRSAFTNLNIAAQPFIPNINAAKFVPAARKV
EIPEEVVQPEVAVPEVVEMTIENSPNAVPEQVESKEMEDDVDVKDEVMNEEVEEVEKVDV
KEVEEPPLSPSLINKEEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEK
NRETWYLSWALDTNQEERDKGKTVEVGRAYFETESKHFTILDAPGHRSFVPNMIGGASQA
DVAVLVISARRGEFETGFERGGQTREHAMLAKTAGVHHLIVLINKMDDSTVKWSQERYDE
CKEKLTPFLKKVGFNPKKDIHFMPCSGLTGANLKESDYANHPWYTGLPLIPYLDNLPTVS
RSGAGPLRLPIVDKYKDMGVIVLGKVESGRLYKGQQLVLQPNKRKLKVLGIQSDEVDTES
AIAGENVKVRVDSIEEDEISKGFVLCSPDDLCSTGTLFDAQIAIIEYKSIICAGYSAILH
IHTCIEEVVIKQLICLLDRKTGEKKKTRFVKQDQTVIARLQTQGPVCIESFKNFPQMGRF
TLRDEGRTIAIGKVLKVLE
Nucleotide sequence
Length: 2,698
>KH2012:KH.C2.618.v1.A.SL6-1
CTGATGACTTTAACATCTATGTTAGGGCCTGGTGATTAAACGGAAATATTAAACAGAAAA
TTAATTATGAATGGACAGAATATTCCAGATGCTTGGGACGATGGAGCAGCAAATGGAACG
GATGGAGTTAGATCCGCTTTTACAAACTTAAACATTGCAGCGCAACCGTTCATTCCAAAC
ATCAATGCCGCCAAGTTTGTCCCGGCAGCAAGAAAAGTGGAAATCCCTGAAGAAGTCGTT
CAACCTGAAGTTGCTGTGCCAGAGGTTGTGGAGATGACGATTGAGAATTCTCCGAATGCC
GTTCCTGAACAGGTTGAGAGTAAAGAGATGGAGGATGATGTCGATGTAAAGGATGAAGTG
ATGAATGAAGAGGTGGAGGAAGTTGAGAAAGTTGATGTGAAAGAGGTTGAGGAACCACCT
TTGTCACCATCCCTAATTAACAAAGAAGAACATGTGAATGTTGTTTTCATCGGCCATGTT
GATGCTGGAAAATCCACAATTGGAGGACAAATTATGTATCTTACTGGAATGGTTGACAAA
CGTACTCTGGAAAAATACGAAAGGGAAGCCAAGGAAAAAAACCGAGAGACATGGTACTTG
TCTTGGGCCTTGGATACAAACCAAGAGGAGAGAGATAAAGGAAAAACAGTAGAAGTAGGG
CGAGCTTATTTCGAGACTGAATCAAAACACTTTACCATTCTCGATGCACCTGGCCATAGA
AGCTTCGTACCTAATATGATAGGTGGGGCTTCACAAGCTGATGTAGCAGTGCTTGTTATC
TCGGCACGTCGAGGAGAGTTTGAAACCGGGTTTGAGCGAGGAGGACAAACACGGGAGCAT
GCTATGTTGGCAAAAACAGCAGGTGTTCACCATCTAATCGTGCTTATTAATAAAATGGAT
GATTCAACTGTTAAGTGGAGTCAGGAACGATATGATGAGTGTAAGGAAAAGCTCACGCCT
TTTTTGAAGAAAGTTGGCTTTAATCCCAAAAAAGACATTCACTTCATGCCCTGCTCTGGA
CTCACAGGAGCAAATCTGAAGGAGTCTGACTATGCTAACCATCCATGGTATACTGGACTC
CCCCTCATTCCTTATTTAGACAATCTTCCCACGGTTTCCAGATCAGGTGCTGGGCCTCTC
CGTCTTCCTATTGTCGACAAGTACAAGGACATGGGGGTGATTGTGCTTGGCAAAGTGGAA
TCTGGTCGTTTGTATAAAGGACAACAGTTGGTATTGCAGCCAAACAAGCGCAAGTTGAAA
GTTCTTGGAATTCAATCTGATGAAGTTGATACAGAGTCCGCCATTGCTGGTGAGAACGTG
AAAGTTCGGGTTGATTCAATTGAAGAAGATGAAATATCTAAGGGTTTCGTCCTATGCTCA
CCTGATGATCTGTGCAGTACAGGAACATTATTTGATGCCCAAATTGCGATTATTGAATAC
AAATCCATCATCTGCGCTGGTTACAGTGCTATTCTACATATTCATACCTGTATTGAAGAA
GTAGTAATCAAACAACTCATTTGTCTTCTGGATCGAAAAACTGGAGAAAAGAAAAAGACA
AGATTTGTCAAACAGGACCAAACCGTAATTGCACGGCTGCAAACACAAGGTCCAGTTTGT
ATCGAGAGTTTCAAGAATTTCCCACAGATGGGTCGATTCACACTTCGGGACGAAGGACGC
ACCATTGCAATCGGGAAAGTGTTAAAAGTTCTTGAGTAAAACTGTAGAAATTTAAAGTTT
TTATTTCACTTCAGCGATGCCATGGCTTGCATATTATTCATGTTAGGCATCTATCGCTGG
GTACAAGCGCAACTCTTACAATCAGTGTTGCACTGTTTCTGCGACACAAGTGTAAATTTC
CCTATTTCTACATTATCCTGATTGTAGACTACTTACTATGTGTTGTTTGCCAAATCTTAA
ATGGTTTTAAGCGGGTACAAATCACAAACTAAAGTTTTCAGCTGATCACCAAAGAAAAAG
TTTATTGAGTGAATCAGATATTTATCTAAGCCAGTACCTTTCAATGCATGCGGACAACAC
ATGTTGTGCGGTTATTCTTTTATTTTCATCAATTAACTATGCTTGTTAATTTCCCTTCAC
AACCTGCTGCTTGTCCAGATCACCATGAAATGTGGTCTAATACTTGTACATTTCACTTTC
ACAACCTCAAGGCTCCCCTTAGCTTACATGGAGTACAATATTTTCATGCGCATACAGTTA
AACCAGAGTTACTTTTACAACCACATAGGTATTTATTCGTTGTACAAATTTGTTGCACCA
ACCACAGGTGGCGATGTTTCTGTTGCATAGTTCTTCTTCTCCACTCGAAAAGCGAAAATT
TGACTTGAAAAAATGATCTGCTTTAGTGCCTTTGTGTGCTTCTCTTTATTTTTGCAGTGT
CCAGTGTCACATGTGAAGACTTGGTTGTTGTGTTTTAAACAACGTTTCCCTACATACAGC
CTAACAGTGGCAGTAAGCGTGAATTTTTTTCATGCAAATGCTGTCGTATCCTATGCGTAT
CAAGTGCACAATTGAAATTGTATAGCACAGCTTGAAAAAGATTTTTTTGTGAATTAACAG
AATTAAAAACCATGTTGTCTTAAATGTGGGCCAATGCTTGTTGGTGGTGCTCTATCATAT
CGCTGTTTAAATTAATTTGGTCTTGGGCTCTTTGTTACAATAAAGATTGAAGGAATAT
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[131-335] 7.34E-61 |
| ProSiteProfiles |
TF_GTP-bd_dom (IPR000795) - T[136-361] 54.696 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[137-334] 9.8E-46 |
| PRINTS |
TF_GTP-bd_dom (IPR000795) - T[140-153] 3.1E-16 - T[199-207] 3.1E-16 - T[219-229] 3.1E-16 - T[235-246] 3.1E-16 - T[279-288] 3.1E-16 |
| ProSitePatterns |
G_TR_CS (IPR031157) - T[192-207] . |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[362-451] 5.41E-21 |
| Pfam |
EFTu-like_2 (IPR004161) - T[379-446] 3.2E-7 |
| Pfam |
Transl_elong_EFTu/EF1A_C (IPR004160) - T[456-557] 6.2E-30 |
| SUPERFAMILY |
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[457-558] 9.87E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HBS1L_HUMAN | 43.091 % | 348 | 5.78E-112 |
| ERF3A_HUMAN | 78.231 % | 718 | 0 |
| ERF3B_HUMAN | 75.991 % | 711 | 0 |