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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'
  2. Transcript 'Moocci.CG.ELv1_2.S33...'
  3. Transcript 'KH2012:KH.C2.64.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C2.64.v1.A.SL2-1

Possible name(s)

SLC6A12; SLC6A13; SLC6A6

Location

KhC2 [3,595,646 / 3,597,456]

Sequences

Amino acid sequence

Length: 187

>KH.C2.64.v1.A.SL2-1
LACTTMEGNPHDFLARNDHHGDGVQEHTNLLDECDSEMTTPPSVGSLSLPPNSNTEEDDT
SKAVSQDSESIAPIPREKWTRKMDFILSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYVI
FLVLGGIPIFFLEVALGQYMSEGGVTSWRLVPIGTGELMSFFHLTARLVSAGNVLFSVFR
IYNAFLL

Nucleotide sequence

Length: 746

>KH2012:KH.C2.64.v1.A.SL2-1
CCCATAATAATAGTAGTCTGTTTAACTTGCGTGCACTACAATGGAAGGTAATCCACACGA
CTTTCTGGCCCGCAACGATCACCATGGTGACGGTGTACAGGAGCACACAAATCTATTGGA
CGAGTGTGACTCAGAAATGACAACACCGCCAAGCGTCGGTTCGTTATCACTTCCTCCTAA
CAGCAATACGGAGGAGGATGACACCAGCAAAGCTGTATCTCAAGATTCCGAATCTATTGC
TCCCATCCCGCGTGAAAAATGGACTCGGAAAATGGATTTTATCCTTTCTGTCGCCGGAGG
TTTCGTTGGCCTTGGAAATGTATGGCGTTTCCCATACCTGTGTTATAAAAACGGCGGAGG
CGCGTTCCTGATCCCGTATGTCATTTTCCTTGTGTTGGGCGGAATCCCGATTTTCTTTCT
CGAAGTTGCGCTTGGTCAGTACATGAGTGAAGGCGGGGTGACGAGTTGGCGACTCGTTCC
AATAGGAACCGGTGAGTTGATGTCCTTTTTCCATTTGACTGCCCGGTTAGTTAGTGCGGG
CAATGTACTGTTTTCTGTGTTTCGCATTTACAATGCATTCTTGCTCTGAATGTTTTACAT
CTGAAGAAGATTCTTTTGGGTCGTGTCACAACACGCCCATCTGATCGAGTGGAATTAGCA
CGTATAACTTCTGTGTCTTTGTTTCCCTATTCACCATCTATGTAGACCTTCCCTGTTTTG
TTTTTAGTTTTAGTTTTTCAAACGGT

InterProScan

PANTHER
Na/ntran_symport (IPR000175) - T[62-156] 8.9E-46
ProSiteProfiles
Na/ntran_symport (IPR000175) - T[75-187] 25.252
Pfam
Na/ntran_symport (IPR000175) - T[76-153] 1.3E-39
SUPERFAMILY
SNS_sf (IPR037272) - T[76-161] 7.32E-35
PRINTS
Na/ntran_symport (IPR000175) - T[84-105] 5.9E-20 - T[113-132] 5.9E-20
ProSitePatterns
Na/ntran_symport (IPR000175) - T[100-114] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SC6A8_HUMAN 53.774 % 126 4.0E-34
S6A13_HUMAN 55.66 % 124 1.56E-33
SC6A6_HUMAN 54.472 % 135 3.14E-37