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TRANSCRIPT CARD

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  1. Clone 'cicl027b03' > 
  2. Region 'REG00000777' > 
  3. Clone 'ma337a04' > 
  4. Transcript 'KH2012:KH.C13.28.v1....' > 
  5. Transcript 'KH2012:KH.C2.669.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.669.v1.A.SL2-1

Possible name(s)

OTUD7A; TNFAIP3; VCPIP1

Gene model

KH2012:KH.C2.669

Location

KhC2 [5,630,979 / 5,638,050]

Sequences

Amino acid sequence

Length: 950

>KH.C2.669.v1.A.SL2-1
YLKMDEEMLDIEADGDVYEGKCPDSKCQTLLYFYLKTSSVECTSCGQQHKQESLLNKKKA
DQAKALQSMISRIIHDQPKKGSDFVRVNGLSNFICKLLSPFLTTYGMNKAGKATLLSELC
NSEIIDCGKVLGSRSFHISPTHIDVEGYGKDRTGSINYLQTLLDTLKTAHNNEERLIPIH
ADGDGHCLVHALSRALIGRELFWHGLRINLQNHLKRKLEQYKIMFKEFHDDTEWDGIIEE
ADPYCTAGGVAAGLGNIHIFALSNILKRPIMLLDSMKNLQNAGDYTGLFVPVMVEPEDCL
SKSPICIAWSGRGHNHFVALVAVEGKTLPHIPKHLVPRIWGVSQEVGQRYLTFNSDGSLT
VCAGKPLKISYTQKLVSAMEELFTDSYKISPTLVAEYYQKVYRPNNMIGIRPDIVTKLAK
NAITEKSLFHCLMCESLQEKSSPPLKDLRPRGRLYQLLVDCHGPPIEGKVYSFPLNKLKC
VYNQSLDRLTVHEYECSKCGTDLRPINGMGEISYKDGDATSTPSAPTAKCMCGKKHYWGG
REYDNLPEELVLSVEWGDKTVHAKVTWFYGDSNPSYNSDPEIEAQKIVDEHFDGMFGTEH
LIQRIATQIRIRCNELALDVGGDSYNMQIDHHKPPCKTFVKRKENSLVMFKKRSVKDDKS
KTAEKIPSLSSSPDSAPSSPKSNGKPKIKLHTLEESITVEVDADTELNELKTLAYQKFNI
PVDQQILKHGYPPKPLEPANGPLGLTNGDSIKVERKSSTITKQSKFMSNKNIEKMLPMIL
KQPAQHGSVTQSLSSTFQPLAQGIPLSEALKNIRTEQSRSIYKTMWDFAVSQPHLFIPGG
VFYRQFQSDIGLEHDKHCKLPLIPDKLFLYNRDEDRVELCLEPYGHFPVNQDVVEHLKQY
EINQSAPQIRMGPGFHMLGDAPTILPQEDQAKSMEQLSKLVQEIKRKNSS

Nucleotide sequence

Length: 3,387

>KH2012:KH.C2.669.v1.A.SL2-1
AAATTTACAGTACAATTTCAATATTAAATTGTATAGAAACTGTATAAAATATATATGATA
CCTTAAAATGGATGAGGAAATGTTGGATATTGAAGCTGATGGTGACGTATATGAAGGAAA
ATGTCCAGATTCAAAATGTCAGACATTGTTGTACTTTTATCTAAAAACTTCATCGGTGGA
ATGCACAAGCTGTGGCCAACAACATAAACAGGAAAGCCTTTTAAATAAGAAAAAGGCAGA
TCAGGCTAAAGCTTTACAGTCAATGATCTCACGTATTATTCATGACCAACCAAAGAAAGG
AAGTGATTTTGTCAGAGTAAATGGATTGTCCAATTTTATTTGTAAACTTCTCTCCCCGTT
CTTAACAACTTATGGAATGAACAAAGCTGGAAAAGCCACCTTGCTAAGTGAACTATGTAA
CTCTGAGATCATAGATTGTGGTAAAGTGCTTGGCTCAAGATCGTTTCATATATCACCCAC
TCATATTGATGTGGAAGGCTATGGGAAGGATAGAACTGGTAGCATCAACTATCTACAAAC
TTTATTAGATACTTTAAAAACTGCACACAACAACGAGGAAAGGTTGATACCAATCCATGC
AGATGGCGACGGACATTGTTTGGTTCACGCTCTTTCTAGAGCTCTAATCGGTCGTGAATT
ATTCTGGCATGGTCTTCGTATTAACTTGCAAAACCACTTAAAGAGAAAATTGGAACAGTA
CAAGATAATGTTTAAAGAGTTCCATGATGATACAGAATGGGATGGAATAATAGAAGAAGC
TGACCCATATTGTACAGCGGGAGGTGTTGCTGCTGGGTTGGGAAATATTCATATTTTTGC
TCTTTCCAACATCTTAAAACGCCCAATCATGTTGCTGGATTCAATGAAGAATTTACAAAA
TGCTGGTGATTACACCGGTCTATTTGTGCCAGTGATGGTGGAACCTGAAGATTGTTTAAG
TAAATCTCCCATCTGCATTGCATGGAGTGGTAGAGGGCATAACCACTTTGTTGCACTAGT
GGCAGTGGAAGGAAAGACATTGCCACACATTCCAAAGCACCTCGTGCCCCGAATATGGGG
TGTAAGTCAAGAAGTAGGTCAGAGGTACCTCACCTTTAACTCAGATGGAAGTTTGACAGT
TTGTGCTGGGAAGCCACTAAAAATCAGTTATACCCAGAAGTTGGTATCAGCGATGGAAGA
ACTTTTTACAGACTCTTACAAAATCTCACCAACACTGGTGGCTGAATACTACCAGAAAGT
ATATCGCCCAAACAACATGATTGGGATTCGACCTGACATTGTTACAAAGCTTGCAAAAAA
TGCAATCACTGAGAAATCCTTGTTTCATTGTCTGATGTGTGAGTCATTACAAGAGAAATC
CTCTCCTCCACTTAAAGATTTACGTCCGAGAGGGCGATTATACCAACTATTGGTCGATTG
CCATGGTCCTCCTATAGAAGGGAAAGTTTACAGCTTTCCATTAAACAAGTTGAAATGTGT
TTACAATCAGAGCTTGGACAGGCTTACAGTTCACGAGTACGAATGTTCGAAATGCGGAAC
TGATCTCCGTCCCATTAATGGTATGGGGGAGATATCGTACAAAGATGGTGATGCGACATC
TACTCCTAGTGCACCAACAGCCAAGTGCATGTGTGGAAAGAAACATTATTGGGGTGGTCG
GGAATATGATAACTTACCCGAAGAACTTGTCTTGTCTGTGGAATGGGGAGATAAAACAGT
TCATGCAAAAGTAACTTGGTTTTATGGCGACTCAAATCCAAGCTATAACAGTGATCCTGA
GATTGAGGCGCAAAAAATAGTAGATGAGCATTTCGATGGAATGTTTGGTACTGAACATCT
TATTCAGAGGATTGCAACACAAATTCGCATTAGGTGTAATGAGCTCGCTTTGGATGTTGG
TGGTGACTCATATAATATGCAGATAGACCATCACAAACCTCCATGTAAAACCTTTGTTAA
GCGAAAAGAAAATTCTTTGGTAATGTTCAAAAAACGCTCTGTAAAAGATGATAAGAGTAA
GACAGCAGAAAAAATACCATCACTCTCGTCCTCTCCTGATTCTGCACCCTCCTCACCGAA
ATCAAACGGAAAACCGAAAATTAAACTTCACACGTTAGAAGAGAGTATTACAGTGGAAGT
TGATGCCGACACAGAATTAAATGAGCTCAAAACGCTTGCATACCAGAAGTTCAACATTCC
TGTCGATCAGCAAATTTTGAAACATGGCTACCCACCAAAACCTCTTGAGCCTGCCAATGG
ACCTCTTGGGCTTACAAATGGAGACAGCATAAAAGTGGAAAGAAAAAGTTCAACAATTAC
GAAGCAGTCGAAATTTATGAGTAACAAAAACATTGAAAAGATGCTGCCAATGATACTCAA
ACAACCAGCACAGCATGGCTCTGTAACGCAAAGCTTATCTAGCACATTTCAGCCTTTAGC
ACAAGGAATTCCACTAAGTGAAGCACTTAAGAATATTCGCACAGAACAAAGCCGGAGCAT
CTATAAAACAATGTGGGACTTTGCTGTATCACAGCCACATTTGTTTATCCCAGGTGGTGT
TTTTTACCGGCAATTTCAGAGCGATATCGGCCTTGAGCATGACAAACACTGTAAACTTCC
ATTGATTCCTGACAAGTTGTTTCTGTACAACAGAGATGAAGATAGGGTGGAGTTATGTTT
GGAACCATACGGACATTTTCCTGTAAACCAGGATGTGGTCGAACATCTAAAACAATATGA
GATAAACCAAAGTGCTCCCCAAATTAGAATGGGACCAGGGTTTCATATGTTGGGTGATGC
CCCTACCATTCTACCACAGGAAGACCAAGCAAAGAGCATGGAGCAATTGTCTAAACTTGT
GCAAGAGATCAAACGAAAAAATAGTTCATAGATCAATGGGTGATTTATGGCAAATTTTCT
GTATGTTTTTAAATATAGTTATTCTCACTATACATAATAAATATATCTGTAACTGTATTG
TTAAGCTATTTCTTTAGGTTAATTAAACAATAGTCCACATGTGTGATGTAATTGAACTTA
AAACAGTGTTTACTACTTGGGTATAAGCTACTTTGAACATACCACCAACTAAATTGCATA
CAGCTACTATGCATTTCTGTTGCCATCCCTATATTATGGATTGTAGATTGTACTATACCT
TTAGACATACTTCTAACTTCTTTCTGACTAGTTCAAATATTTTATGTTAAGTCGAGCATC
AATTTGTTGTTTTCAAACAGCTTGGTGTGACTGCAGATATCTAACTAGCATCAAAGATTA
AATGTCCTATCTTTTTCTTCCATGTGAGTGCAATTTCAGATCTGTTTTTATAAAATCTGT
AAATTAAATATTTTATTTCTTATTGTG

InterProScan

ProSiteProfiles
OTU_dom (IPR003323) - T[176-323] 14.063
Pfam
OTU_dom (IPR003323) - T[183-301] 2.7E-11
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[669-736] 7.4E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VCIP1_HUMAN 37.293 % 624 0