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TRANSCRIPT CARD

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  1. Region 'REG00001358' > 
  2. Transcript 'KH2012:KH.C3.798.v1....' > 
  3. Transcript 'Harore.CG.MTP2014.S8...' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...' > 
  5. Transcript 'KH2012:KH.C2.669.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.669.v1.A.SL4-1

Possible name(s)

OTUD7A; TNFAIP3; VCPIP1

Gene model

KH2012:KH.C2.669

Location

KhC2 [5,630,979 / 5,638,057]

Sequences

Amino acid sequence

Length: 950

>KH.C2.669.v1.A.SL4-1
YLKMDEEMLDIEADGDVYEGKCPDSKCQTLLYFYLKTSSVECTSCGQQHKQESLLNKKKA
DQAKALQSMISRIIHDQPKKGSDFVRVNGLSNFICKLLSPFLTTYGMNKAGKATLLSELC
NSEIIDCGKVLGSRSFHISPTHIDVEGYGKDRTGSINYLQTLLDTLKTAHNNEERLIPIH
ADGDGHCLVHALSRALIGRELFWHGLRINLQNHLKRKLEQYKIMFKEFHDDTEWDGIIEE
ADPYCTAGGVAAGLGNIHIFALSNILKRPIMLLDSMKNLQNAGDYTGLFVPVMVEPEDCL
SKSPICIAWSGRGHNHFVALVAVEGKTLPHIPKHLVPRIWGVSQEVGQRYLTFNSDGSLT
VCAGKPLKISYTQKLVSAMEELFTDSYKISPTLVAEYYQKVYRPNNMIGIRPDIVTKLAK
NAITEKSLFHCLMCESLQEKSSPPLKDLRPRGRLYQLLVDCHGPPIEGKVYSFPLNKLKC
VYNQSLDRLTVHEYECSKCGTDLRPINGMGEISYKDGDATSTPSAPTAKCMCGKKHYWGG
REYDNLPEELVLSVEWGDKTVHAKVTWFYGDSNPSYNSDPEIEAQKIVDEHFDGMFGTEH
LIQRIATQIRIRCNELALDVGGDSYNMQIDHHKPPCKTFVKRKENSLVMFKKRSVKDDKS
KTAEKIPSLSSSPDSAPSSPKSNGKPKIKLHTLEESITVEVDADTELNELKTLAYQKFNI
PVDQQILKHGYPPKPLEPANGPLGLTNGDSIKVERKSSTITKQSKFMSNKNIEKMLPMIL
KQPAQHGSVTQSLSSTFQPLAQGIPLSEALKNIRTEQSRSIYKTMWDFAVSQPHLFIPGG
VFYRQFQSDIGLEHDKHCKLPLIPDKLFLYNRDEDRVELCLEPYGHFPVNQDVVEHLKQY
EINQSAPQIRMGPGFHMLGDAPTILPQEDQAKSMEQLSKLVQEIKRKNSS

Nucleotide sequence

Length: 3,394

>KH2012:KH.C2.669.v1.A.SL4-1
TACAAAGAAATTTACAGTACAATTTCAATATTAAATTGTATAGAAACTGTATAAAATATA
TATGATACCTTAAAATGGATGAGGAAATGTTGGATATTGAAGCTGATGGTGACGTATATG
AAGGAAAATGTCCAGATTCAAAATGTCAGACATTGTTGTACTTTTATCTAAAAACTTCAT
CGGTGGAATGCACAAGCTGTGGCCAACAACATAAACAGGAAAGCCTTTTAAATAAGAAAA
AGGCAGATCAGGCTAAAGCTTTACAGTCAATGATCTCACGTATTATTCATGACCAACCAA
AGAAAGGAAGTGATTTTGTCAGAGTAAATGGATTGTCCAATTTTATTTGTAAACTTCTCT
CCCCGTTCTTAACAACTTATGGAATGAACAAAGCTGGAAAAGCCACCTTGCTAAGTGAAC
TATGTAACTCTGAGATCATAGATTGTGGTAAAGTGCTTGGCTCAAGATCGTTTCATATAT
CACCCACTCATATTGATGTGGAAGGCTATGGGAAGGATAGAACTGGTAGCATCAACTATC
TACAAACTTTATTAGATACTTTAAAAACTGCACACAACAACGAGGAAAGGTTGATACCAA
TCCATGCAGATGGCGACGGACATTGTTTGGTTCACGCTCTTTCTAGAGCTCTAATCGGTC
GTGAATTATTCTGGCATGGTCTTCGTATTAACTTGCAAAACCACTTAAAGAGAAAATTGG
AACAGTACAAGATAATGTTTAAAGAGTTCCATGATGATACAGAATGGGATGGAATAATAG
AAGAAGCTGACCCATATTGTACAGCGGGAGGTGTTGCTGCTGGGTTGGGAAATATTCATA
TTTTTGCTCTTTCCAACATCTTAAAACGCCCAATCATGTTGCTGGATTCAATGAAGAATT
TACAAAATGCTGGTGATTACACCGGTCTATTTGTGCCAGTGATGGTGGAACCTGAAGATT
GTTTAAGTAAATCTCCCATCTGCATTGCATGGAGTGGTAGAGGGCATAACCACTTTGTTG
CACTAGTGGCAGTGGAAGGAAAGACATTGCCACACATTCCAAAGCACCTCGTGCCCCGAA
TATGGGGTGTAAGTCAAGAAGTAGGTCAGAGGTACCTCACCTTTAACTCAGATGGAAGTT
TGACAGTTTGTGCTGGGAAGCCACTAAAAATCAGTTATACCCAGAAGTTGGTATCAGCGA
TGGAAGAACTTTTTACAGACTCTTACAAAATCTCACCAACACTGGTGGCTGAATACTACC
AGAAAGTATATCGCCCAAACAACATGATTGGGATTCGACCTGACATTGTTACAAAGCTTG
CAAAAAATGCAATCACTGAGAAATCCTTGTTTCATTGTCTGATGTGTGAGTCATTACAAG
AGAAATCCTCTCCTCCACTTAAAGATTTACGTCCGAGAGGGCGATTATACCAACTATTGG
TCGATTGCCATGGTCCTCCTATAGAAGGGAAAGTTTACAGCTTTCCATTAAACAAGTTGA
AATGTGTTTACAATCAGAGCTTGGACAGGCTTACAGTTCACGAGTACGAATGTTCGAAAT
GCGGAACTGATCTCCGTCCCATTAATGGTATGGGGGAGATATCGTACAAAGATGGTGATG
CGACATCTACTCCTAGTGCACCAACAGCCAAGTGCATGTGTGGAAAGAAACATTATTGGG
GTGGTCGGGAATATGATAACTTACCCGAAGAACTTGTCTTGTCTGTGGAATGGGGAGATA
AAACAGTTCATGCAAAAGTAACTTGGTTTTATGGCGACTCAAATCCAAGCTATAACAGTG
ATCCTGAGATTGAGGCGCAAAAAATAGTAGATGAGCATTTCGATGGAATGTTTGGTACTG
AACATCTTATTCAGAGGATTGCAACACAAATTCGCATTAGGTGTAATGAGCTCGCTTTGG
ATGTTGGTGGTGACTCATATAATATGCAGATAGACCATCACAAACCTCCATGTAAAACCT
TTGTTAAGCGAAAAGAAAATTCTTTGGTAATGTTCAAAAAACGCTCTGTAAAAGATGATA
AGAGTAAGACAGCAGAAAAAATACCATCACTCTCGTCCTCTCCTGATTCTGCACCCTCCT
CACCGAAATCAAACGGAAAACCGAAAATTAAACTTCACACGTTAGAAGAGAGTATTACAG
TGGAAGTTGATGCCGACACAGAATTAAATGAGCTCAAAACGCTTGCATACCAGAAGTTCA
ACATTCCTGTCGATCAGCAAATTTTGAAACATGGCTACCCACCAAAACCTCTTGAGCCTG
CCAATGGACCTCTTGGGCTTACAAATGGAGACAGCATAAAAGTGGAAAGAAAAAGTTCAA
CAATTACGAAGCAGTCGAAATTTATGAGTAACAAAAACATTGAAAAGATGCTGCCAATGA
TACTCAAACAACCAGCACAGCATGGCTCTGTAACGCAAAGCTTATCTAGCACATTTCAGC
CTTTAGCACAAGGAATTCCACTAAGTGAAGCACTTAAGAATATTCGCACAGAACAAAGCC
GGAGCATCTATAAAACAATGTGGGACTTTGCTGTATCACAGCCACATTTGTTTATCCCAG
GTGGTGTTTTTTACCGGCAATTTCAGAGCGATATCGGCCTTGAGCATGACAAACACTGTA
AACTTCCATTGATTCCTGACAAGTTGTTTCTGTACAACAGAGATGAAGATAGGGTGGAGT
TATGTTTGGAACCATACGGACATTTTCCTGTAAACCAGGATGTGGTCGAACATCTAAAAC
AATATGAGATAAACCAAAGTGCTCCCCAAATTAGAATGGGACCAGGGTTTCATATGTTGG
GTGATGCCCCTACCATTCTACCACAGGAAGACCAAGCAAAGAGCATGGAGCAATTGTCTA
AACTTGTGCAAGAGATCAAACGAAAAAATAGTTCATAGATCAATGGGTGATTTATGGCAA
ATTTTCTGTATGTTTTTAAATATAGTTATTCTCACTATACATAATAAATATATCTGTAAC
TGTATTGTTAAGCTATTTCTTTAGGTTAATTAAACAATAGTCCACATGTGTGATGTAATT
GAACTTAAAACAGTGTTTACTACTTGGGTATAAGCTACTTTGAACATACCACCAACTAAA
TTGCATACAGCTACTATGCATTTCTGTTGCCATCCCTATATTATGGATTGTAGATTGTAC
TATACCTTTAGACATACTTCTAACTTCTTTCTGACTAGTTCAAATATTTTATGTTAAGTC
GAGCATCAATTTGTTGTTTTCAAACAGCTTGGTGTGACTGCAGATATCTAACTAGCATCA
AAGATTAAATGTCCTATCTTTTTCTTCCATGTGAGTGCAATTTCAGATCTGTTTTTATAA
AATCTGTAAATTAAATATTTTATTTCTTATTGTG

InterProScan

ProSiteProfiles
OTU_dom (IPR003323) - T[176-323] 14.063
Pfam
OTU_dom (IPR003323) - T[183-301] 2.7E-11
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[669-736] 7.4E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VCIP1_HUMAN 37.293 % 624 0