- Transcript 'KH2012:KH.L170.28.v3...' >
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- Transcript 'KH2012:KH.C2.683.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.683.v1.A.SL3-1
Possible name(s)
AGO1; AGO2; AGO3
Gene model
Location
KhC2 [1,003,555 / 1,010,591]
Amino acid sequence
Length: 943
>KH.C2.683.v1.A.SL3-1
NLHRYWRQTSVPCPWTLPFMKFTENNLSNPMYQPTGPGQPILPQYGALAGGVPPPQGPAP
PGVPPNPMQQAPPAQLIPPNGRPTMDPRFPIATVARDIDFQAPPRPNQGQVGKPIWLKAN
YFKVSIPNGDIHHYDIDIKPDKCPRRVNREIINTMVENFRSAIFQDRKPVFDGRKNLYTA
QPLPIDKQKLEVEVTLPGEGRDRTFTVAIKWASRVSLYSLKLALEGKMHGIPFETVQSLD
VVMRHLPSLRYTPVGRSFFSAPEGYTPPLGGGREVWFGFHQSMRPSQWKMMLNIDVSATA
FYRAQSCVQFLCDVLELRIEDLRLIRGLTDSQRVKFTKEIRGLKVEITHCGTMRRKYRVC
NVTRRAASTQTFPLQLESGQTIECSVARYFQEKHSKTLQFPFLPCLQVGQEQKHTYLPIE
VCNIVQGQRCIKKLTDSQTSTMIKATARSAPDREKEIAQLVRKAQFNNDPYVKEFGIQVI
DEMTEVRGRVLPPPKIQYGGDVSSPLMQATPNQGVWDMRGKQFHSGISIDVWAIACFAHQ
RMCSDQHLRTFIKSLQRISEDAGMPIRGTPVFCKYAQGSEHVEPLFRHLCDEFRALQLIV
VILPGKTPVYAEVKRVGDTLLGIATQCVQVKNVVKTSPQTLSNLCLKINVKLGGVNNILV
PSLRPKVFNDPVIFFGADVTHPPAGDTRKPSIAAVVGSMDAHPSRYSATVRVQQHREEII
RDLAIMVRDLMVEFYKATHYKPVRVIMYRDGVSEGQFQQVLSTELRAIREACTMLEVGYQ
PGITFIVVQKRHHTRLFCRNHEDRSGKSGNIPAGTTVDIGICHPTEFDFYLCSHAGIQGT
SRPSHYHVLWDDNNFMADELQVLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVD
KDHDSGEGSLQSGHTQHDQDAQLQAMSKAVVVHENTVRNMYFA
Nucleotide sequence
Length: 3,752
>KH2012:KH.C2.683.v1.A.SL3-1
TTTTAGTGTGTATTTTTTTCTTTATAAAAAGTTTTACTAAAATTTGCATCGCTACTGGCG
TCAAACGTCGGTACCTTGCCCCTGGACACTGCCTTTTATGAAGTTCACCGAGAACAATTT
GAGTAATCCAATGTATCAGCCGACGGGTCCGGGCCAGCCAATATTGCCACAATATGGCGC
CCTGGCAGGGGGGGTTCCACCACCACAGGGTCCTGCCCCACCTGGAGTCCCACCCAACCC
CATGCAGCAAGCACCACCTGCCCAGCTGATTCCACCAAACGGAAGACCTACAATGGACCC
TCGCTTCCCCATCGCTACTGTGGCACGCGATATCGACTTCCAAGCTCCTCCCAGACCAAA
CCAAGGTCAAGTTGGGAAACCAATCTGGTTAAAAGCAAACTACTTTAAAGTTTCCATTCC
TAATGGAGATATTCATCATTATGATATTGATATTAAACCTGACAAGTGTCCACGACGAGT
AAACAGAGAGATTATTAACACGATGGTAGAAAACTTTCGTTCAGCTATTTTTCAAGATCG
TAAACCTGTGTTTGATGGACGCAAGAACCTATACACGGCACAACCTCTTCCAATTGATAA
ACAGAAGCTTGAAGTTGAAGTTACATTGCCTGGTGAAGGCAGAGATCGTACATTTACTGT
GGCAATCAAGTGGGCATCTAGGGTTTCCCTTTATTCTCTCAAGCTTGCACTTGAAGGAAA
AATGCATGGCATTCCATTTGAAACAGTACAGTCTCTTGATGTAGTGATGCGTCATTTGCC
ATCACTAAGATACACCCCTGTTGGTCGATCTTTCTTTTCAGCGCCAGAAGGCTACACCCC
TCCACTTGGTGGTGGTAGAGAGGTGTGGTTTGGATTTCATCAATCCATGCGCCCATCACA
ATGGAAAATGATGCTTAACATCGATGTGTCAGCCACTGCTTTCTATCGGGCTCAATCATG
TGTTCAATTCCTTTGTGACGTTCTTGAACTAAGAATTGAAGATTTGAGATTGATCAGAGG
TTTGACAGACTCACAGCGTGTTAAGTTCACAAAAGAAATTCGTGGATTGAAGGTTGAGAT
AACTCACTGTGGAACAATGCGTCGTAAATATCGTGTATGTAATGTGACAAGGAGAGCTGC
TTCTACACAAACATTCCCACTTCAGTTGGAATCTGGTCAAACCATTGAATGTTCTGTTGC
CAGATATTTCCAGGAAAAACATTCAAAGACTCTGCAGTTTCCCTTCCTTCCTTGTTTGCA
AGTTGGCCAGGAACAAAAGCACACCTACCTTCCAATTGAAGTATGTAATATCGTTCAAGG
TCAAAGATGTATTAAAAAATTAACTGACAGCCAAACCTCAACAATGATCAAGGCTACTGC
ACGTTCAGCACCAGATCGGGAGAAAGAAATTGCGCAGTTGGTTCGCAAAGCTCAGTTTAA
CAACGATCCTTATGTGAAGGAGTTTGGAATACAGGTTATTGATGAAATGACTGAGGTTCG
TGGAAGAGTGCTTCCACCACCCAAGATTCAATATGGTGGAGATGTAAGTTCCCCTCTAAT
GCAAGCTACTCCAAACCAAGGTGTGTGGGATATGAGGGGAAAACAATTCCATTCTGGTAT
CAGCATAGATGTGTGGGCAATCGCTTGTTTTGCTCATCAGAGAATGTGCTCGGACCAACA
TTTACGAACATTCATCAAGAGTTTGCAACGTATATCGGAAGATGCTGGCATGCCAATTCG
TGGCACCCCCGTCTTCTGTAAATATGCACAAGGTTCTGAGCATGTTGAACCATTGTTCAG
GCACCTGTGCGATGAGTTCCGTGCCCTGCAGTTAATTGTTGTTATTCTACCTGGCAAAAC
TCCAGTATACGCTGAGGTAAAGAGAGTTGGGGATACTCTGCTTGGTATTGCTACCCAGTG
TGTACAGGTCAAGAATGTGGTAAAAACATCACCTCAAACTCTTTCCAACCTTTGCTTGAA
GATCAATGTGAAACTTGGTGGTGTTAATAACATCCTTGTTCCATCACTGAGGCCAAAGGT
ATTTAATGATCCTGTAATATTCTTTGGTGCTGATGTTACTCACCCACCAGCTGGAGATAC
AAGAAAACCTTCCATTGCTGCTGTTGTGGGTAGCATGGATGCCCACCCATCTCGTTATAG
TGCCACAGTGAGGGTGCAACAACATCGAGAAGAAATAATCCGTGATCTTGCCATCATGGT
TCGTGATCTGATGGTGGAATTTTACAAAGCAACTCATTATAAACCTGTTAGAGTTATCAT
GTACAGAGATGGAGTATCTGAAGGGCAGTTTCAACAGGTGCTGTCAACGGAGCTTCGTGC
CATTCGTGAAGCTTGCACAATGCTTGAGGTTGGTTACCAACCTGGCATTACATTCATTGT
GGTACAGAAGCGACATCATACTCGTCTATTTTGTCGGAATCACGAGGACAGGAGTGGTAA
AAGTGGAAACATACCAGCTGGAACCACTGTTGATATTGGTATCTGCCATCCAACTGAGTT
TGACTTTTACCTCTGCAGTCATGCTGGTATTCAGGGCACATCCAGACCCTCGCATTACCA
TGTGTTATGGGATGATAATAACTTCATGGCTGATGAGCTTCAAGTTCTTACCTATCAACT
TTGCCATACATACGTTCGCTGCACCAGATCCGTATCTATACCTGCCCCAGCATATTATGC
TCACTTGGTGGCGTTCAGAGCTCGTTATCACTTGGTGGACAAAGACCACGACAGTGGTGA
AGGTTCCTTACAAAGTGGACATACACAACACGATCAAGATGCACAGTTGCAAGCCATGTC
CAAGGCAGTTGTTGTACATGAGAATACTGTGAGGAACATGTACTTTGCATGAGTGCATTC
AACTACATTAGCTCAAGTTTTGCATGTTTTTAGGAAAATCTCTGTTTTTGAGTGTTTTAT
CTAATTTCATTCTATTTTATGCGATGAACAGAGTGCTTTCCACACTTGTAGAATATGAAC
AATAATTAAACTGTGATAACTCCCCACGATCAAGTGTGGTTGTGAGCAAATCATGTTAAT
GGTGTAAACCACCATTTAATTGTCTGTACTTACCAAGTTCACCTAATATATATAAACACA
TATTGTAAAAAACCTGATTGTCATTGTATTCATCCTTACTAGATTGTACAAACCATAATA
TCCAACATAGCTACTACATATGTACAAAATTGTACAGTATGCGTTATCCCCCTTATACTA
ATGATTAATAAAATGTACAGCAGTAAGGATAAACAAATTGATTCCAAAATTGACTGTTTA
TGTTCGTTCATTTATGCTGCGTGTTGTGAAGCAGCAGAAAGTTCTTGTTTGATCAATGCT
TGCCACCGTGGTGTTTTTATACAAGGCGCTGGGTTGCCAGACAAAAGTGAACCCATAGCA
ACCACCGAAACCCAAAGAGGTTGCTTACCTGCGTATGACCGTGTCATCGCGGACCTTTTG
TCTGGCAAGTATAACCAGTGCCTGTAATGGTTTCCTCAAAAGATTGTAAATGTGTAATTA
CTTGTCAATCCTTTGTACTCTGTACATATTCTTTTACTGTACATACACTTCAGTCGCATA
CAAACCATAACAATTCCAACTGTATAATATTAATCTAAACTTTATTTTGTATTGTTGTGT
TATACAACCATTTTAGAATAACTTTTTAACACAAAAATAGGCGGAAATTATAATGAAACT
CCTGGAGTAGCTGCTTGTAAACATAGCGCTTG
| Pfam |
Argonaute_N (IPR032474) - T[113-243] 1.2E-30 |
| SUPERFAMILY |
PAZ_dom_sf (IPR036085) - T[115-467] 1.05E-61 |
| SMART |
ArgoL1 (IPR014811) - T[252-304] 1.0E-26 |
| Pfam |
ArgoL1 (IPR014811) - T[253-303] 1.4E-22 |
| SMART |
PAZ_dom (IPR003100) - T[312-448] 0.0014 |
| Pfam |
PAZ_dom (IPR003100) - T[327-443] 1.2E-23 |
| ProSiteProfiles |
PAZ_dom (IPR003100) - T[328-426] 26.63 |
| Pfam |
ArgoL2 (IPR032472) - T[452-498] 3.0E-16 |
| Pfam |
Argonaute_Mid_dom (IPR032473) - T[510-590] 8.3E-31 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[596-900] 2.15E-87 |
| Pfam |
Piwi (IPR003165) - T[598-898] 2.4E-109 |
| SMART |
Piwi (IPR003165) - T[598-899] 1.3E-126 |
| ProSiteProfiles |
Piwi (IPR003165) - T[598-899] 51.97 |
| Gene3D |
RNaseH_sf (IPR036397) - T[663-943] 6.4E-130 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AGO2_HUMAN | 73.018 % | 1299 | 0 |
| AGO1_HUMAN | 71.09 % | 1259 | 0 |
| AGO3_HUMAN | 69.871 % | 1236 | 0 |