Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.690.v1.A.SL1-1

Possible name(s)

TMEM41A; TMEM41B

Gene model

KH2012:KH.C2.690

Location

KhC2 [2,471,459 / 2,476,687]

Sequences

Amino acid sequence

Length: 276

>KH.C2.690.v1.A.SL1-1
KMSQRRPVVEQVGRREQEITPETSSNIDEKKSDSTKFSIFVLVVIFISASALIYSVYNNF
PELEVDEKAKVKLPRDMEDAKELGRVLSKYKDMYYYEVTSAFFITYIFLQTFAIPGSVFL
SILSGFLYPFYIALFLVCLCSGIGATGCYMISFFIGKPIVDKYLSARVQKWNEVVDGQRE
HLFNYLLFLRITPFLPNWFINIVSPVIHIPVSIFFFATFIGVAPLSFIAIQAGTTLYQLT
TAGDAFSWTGILIMAVLAVLSLLPVVFKNRLKNKYE

Nucleotide sequence

Length: 1,199

>KH2012:KH.C2.690.v1.A.SL1-1
AACTTGTATATATATTTGGAACATACCAGAAAGTTATTAATTATAAAAAATGTCACAAAG
AAGACCTGTCGTTGAACAAGTTGGACGAAGAGAACAGGAGATAACACCTGAAACATCAAG
TAATATTGATGAGAAAAAATCAGATTCTACGAAGTTTTCAATCTTTGTTCTGGTTGTAAT
ATTCATCTCAGCTTCTGCACTCATATACTCCGTTTACAATAATTTTCCTGAACTCGAAGT
AGATGAGAAAGCCAAAGTAAAGTTGCCGAGAGATATGGAGGATGCCAAGGAACTTGGGAG
GGTCTTATCGAAATATAAGGACATGTACTACTATGAAGTTACCTCAGCATTTTTTATTAC
TTACATATTTCTTCAAACTTTCGCAATCCCAGGCTCAGTGTTTCTCAGTATTTTATCTGG
ATTTCTTTACCCCTTCTACATTGCACTGTTCCTTGTTTGTTTGTGTTCAGGCATTGGTGC
GACTGGTTGTTACATGATTTCTTTCTTTATCGGGAAGCCAATTGTTGACAAATATCTGTC
AGCGCGAGTCCAAAAGTGGAACGAAGTGGTTGATGGGCAGAGGGAACACCTTTTTAATTA
CTTGTTGTTTTTACGAATTACACCGTTTCTGCCCAACTGGTTCATCAACATTGTATCGCC
GGTTATTCACATTCCAGTTTCAATATTCTTCTTCGCTACTTTCATTGGGGTTGCTCCACT
ATCTTTCATTGCCATACAAGCTGGAACAACTTTATATCAACTTACAACTGCTGGTGATGC
ATTCTCATGGACAGGAATCCTGATTATGGCAGTACTTGCTGTGTTGTCTTTGCTGCCAGT
TGTGTTTAAAAATCGCTTAAAAAATAAATATGAGTGATTTCTTTTGGTAATTTTTGTGCA
GTTGTGTGTGTACTTGGTTGTGCAATAGTATTTGTGGTTGATGTACTGAAAACAAAAAAT
GTTAAACTTTAACATTCATTTTTTTGTGTTAAAGATTACTGCTAAACAAATTGTATACAG
TTGTGTTATAAATTACTGCTGTGTAGTGATAGAACGTTATTATTATATGGTAAAGGATTT
TATTTTGTGGAGACACAGCTGTTTTATACGTACCATATTGGTGCTGATAGCACCGATTGG
CAAGAATGCAAGCACACATTATTTAATTTTTAATAAATGACACTTTAGAGTTGTTTTAA

InterProScan

Pfam	SNARE_assoc (IPR032816) - T[114-233] 1.3E-19

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TM41B_HUMAN	57.875 %	342	4.98E-119
TM41A_HUMAN	33.75 %	139	9.1E-40