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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'KH2012:KH.C2.693.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL11-1

Possible name(s)

RPS3A

Location

KhC2 [2,684,384 / 2,688,009]

Sequences

Amino acid sequence

Length: 276

>KH.C2.693.v1.A.nonSL11-1
KSGLFSTQCRMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAVFKNRQIGKTLVS
RTVGTKIAADGLKGRVFECNQADLHGDESTYRKMKLIVEDVQGKHCLTNFHGMSLTRDKL
CSMVKKWQTLIEASCDVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQHMQVINIRAKMIE
IMTREVNLGNLRELVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKVLKKPKLDLGRLME
MHGEGSAKTGQSKSDTGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,276

>KH2012:KH.C2.693.v1.A.nonSL11-1
AAATCCGGTCTCTTTTCAACACAGTGCAGGATGGCCGTGGGTAAAAATAAACGCCTGACC
AAAGGGGGCAAAAAGGGTGGAAAAAAGAAGATCGTCGACCCATTCTCCAAGAAGGATTGG
TATGATGTAAAGGCTCCAGCCGTGTTCAAAAACCGTCAAATCGGTAAAACTTTGGTGTCA
AGAACCGTTGGAACAAAAATTGCAGCTGATGGTTTAAAAGGCCGAGTCTTTGAGTGCAAT
CAGGCTGATTTGCATGGCGACGAATCAACTTATCGAAAGATGAAGTTGATTGTTGAAGAT
GTTCAAGGCAAACATTGTCTCACCAACTTCCATGGCATGAGTCTCACCAGGGACAAGTTA
TGCTCAATGGTAAAAAAGTGGCAAACATTGATCGAAGCATCATGTGATGTATCAACCACT
GACGGATACAAGGTCCGTATGTTCTGCATTGGATTCACTCACAGGAGAAGCAATCAGATC
AAAAAAACATCTTACGCCCAACACATGCAGGTGATTAACATCCGAGCCAAGATGATCGAA
ATCATGACACGAGAGGTGAACCTCGGTAACCTTCGTGAGCTCGTGAACAAACTCATCCCT
GACTCCATTGCTAAGGATATTGAGAAGGCTTGCCAAGGCATTTACCCTCTTCATGATGTT
CATATAAGAAAGGTTAAGGTGCTGAAGAAGCCAAAGCTTGACCTTGGTCGATTGATGGAG
ATGCATGGTGAAGGAAGTGCCAAAACTGGCCAATCCAAGTCCGACACTGGATCCAAGGTG
GAACGCTCTGGCGGTGACAGTTATGAACCACCAGTCCAAGATTCCGTTTAAATAATAAAA
TCGGAAAACAAGTTTATGAGTGTAGTTGGTTGTTGTTACGCGGTAGCTTACCAGTTGCTC
AAAAGAGTTTGGTGAAGTAGTGTAGACTGAATTATTCATTTATTGATATAATGTAGAAGT
CTTGTTGTGTTACTATGTGTCGATAGATGTTATGCTCTTGCTGTTCTAAGTGAATTTTGG
TTACATATATCCATCTGTGGGTAGAATACGCTTGACATGCACTATTTTAAATGGTTAAAG
ACTAAACCCCTCAATAAGTTTTATTCGAGTATTCCATGGGTTGAATAACGTATTGTTGCT
ATCAAATGATATACCGCACATTGAATTGCACATCAATTGATTTGGGGTTTGGTCAACTTA
AAGTGAGCGAAATTTGACGGTGTTTTTTAATGTTGGTCAATCTGGACGGGAGATGTCGCT
AGTGGGTCAAAAAAAT

InterProScan

Hamap
Ribosomal_S1/3_euk (IPR027500) - T[11-276] 39.413
SMART
Ribosomal_S3Ae (IPR001593) - T[26-231] 3.1E-133
Pfam
Ribosomal_S3Ae (IPR001593) - T[26-231] 9.8E-96

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3A_HUMAN 74.06 % 395 1.91E-140